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SCNpilot_expt_1000_bf_scaffold_14122

Search features with annotation key words

Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_14122_1
Paracoccus denitrificans, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..854)
DNA (852bp) protein (284aa)
Beta-lactamase domain protein n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1BB73_PARDP
beta-lactamase domain-containing protein
Beta-lactamase domain protein {ECO:0000313|EMBL:ABL72767.1}; TaxID=318586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus denitrificans (strain Pd 1222).;"
SCNpilot_expt_1000_bf_scaffold_14122_2
Celeribacter indicus, Celeribacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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1066..1917
DNA (852bp) protein (284aa)
Formyltetrahydrofolate deformylase {ECO:0000256|HAMAP-Rule:MF_01927}; EC=3.5.1.10 {ECO:0000256|HAMAP-Rule:MF_01927};; Formyl-FH(4) hydrolase {ECO:0000256|HAMAP-Rule:MF_01927}; TaxID=1208324 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Celeribacter.;" source="Celeribacter indicus.;"
purU; formyltetrahydrofolate deformylase (EC:3.5.1.10)
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI000315FD79
SCNpilot_expt_1000_bf_scaffold_14122_3
Lutibaculum baratangense, Lutibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1914..2780
DNA (867bp) protein (289aa)
Methylenetetrahydrofolate reductase {ECO:0000256|RuleBase:RU003862}; EC=1.5.1.20 {ECO:0000256|RuleBase:RU003862};; TaxID=631454 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Lutibaculum.;" source="Lutibaculum baratangense AMV1.;"
metF; methylenetetrahydrofolate reductase (EC:1.5.1.20); K00297 methylenetetrahydrofolate reductase (NADPH) [EC:1.5.1.20]
5,10-methylenetetrahydrofolate reductase n=1 Tax=Lutibaculum baratangense AMV1 RepID=V4RUD8_9RHIZ
SCNpilot_expt_1000_bf_scaffold_14122_4
unknown

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3298..3606
DNA (309bp) protein (103aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_14122_5
Achromobacter insuavis, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3611..6211
DNA (2601bp) protein (867aa)
Outer membrane autotransporter barrel domain-containing protein 9 n=1 Tax=Achromobacter xylosoxidans AXX-A RepID=F7SX34_ALCXX
Outer membrane autotransporter barrel domain-containing protein 9 {ECO:0000313|EMBL:EGP47371.1}; TaxID=1003200 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter insuavis AXX-A.;"
autotransporter
SCNpilot_expt_1000_bf_scaffold_14122_6
Mesorhizobium opportunistum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6157..6729
DNA (573bp) protein (191aa)
Outer membrane autotransporter barrel domain protein n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7Y092_MESOW
outer membrane autotransporter barrel domain-containing protein
Outer membrane autotransporter barrel domain protein {ECO:0000313|EMBL:AEH90458.1}; Flags: Precursor;; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075).;"
SCNpilot_expt_1000_bf_scaffold_14122_7
Mesorhizobium sp. L103C119B0, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6862..7815)
DNA (954bp) protein (318aa)
UPI0003CFF27E related cluster n=1 Tax=unknown RepID=UPI0003CFF27E rbh
Aminopeptidase {ECO:0000313|EMBL:ESZ69936.1}; TaxID=1287085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L103C119B0.;"
hypothetical protein rbh
Displaying 7 items

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