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SCNpilot_expt_1000_bf_scaffold_13467

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_13467_1
Rhizobium sp. CF122, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(24..533)
DNA (510bp) protein (170aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. CF122 RepID=J2RUS0_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EJL56377.1}; Flags: Precursor;; TaxID=1144312 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF122.;"
SCNpilot_expt_1000_bf_scaffold_13467_2
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(667..942)
DNA (276bp) protein (92aa)
L-arabinose 1-dehydrogenase {ECO:0000313|EMBL:CDX42897.1}; EC=1.1.1.120 {ECO:0000313|EMBL:CDX42897.1};; EC=1.1.1.46 {ECO:0000313|EMBL:CDX42897.1};; EC=1.1.1.48 {ECO:0000313|EMBL:CDX42897.1};; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
galactose 1-dehydrogenase (EC:1.1.1.48); K00035 D-galactose 1-dehydrogenase [EC:1.1.1.48]
UPI0003D05434 related cluster n=1 Tax=unknown RepID=UPI0003D05434
SCNpilot_expt_1000_bf_scaffold_13467_3
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1139..1531)
DNA (393bp) protein (131aa)
L-arabinose 1-dehydrogenase {ECO:0000313|EMBL:CDX60735.1}; EC=1.1.1.120 {ECO:0000313|EMBL:CDX60735.1};; EC=1.1.1.46 {ECO:0000313|EMBL:CDX60735.1};; EC=1.1.1.48 {ECO:0000313|EMBL:CDX60735.1};; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
galactose 1-dehydrogenase; K00035 D-galactose 1-dehydrogenase [EC:1.1.1.48]
Galactose 1-dehydrogenase n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98N63_RHILO
SCNpilot_expt_1000_bf_scaffold_13467_4
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1635..1916)
DNA (282bp) protein (94aa)
Two component response regulator n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98N62_RHILO
Two component response regulator {ECO:0000313|EMBL:CDX35456.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
two component response regulator
SCNpilot_expt_1000_bf_scaffold_13467_5
Mesorhizobium sp. LNHC221B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2383..2754
DNA (372bp) protein (124aa)
30S ribosomal protein S12 n=12 Tax=Mesorhizobium RepID=RS12_RHILO
ribosomal protein S12, bacterial/organelle
30S ribosomal protein S12 {ECO:0000256|HAMAP-Rule:MF_00403, ECO:0000256|RuleBase:RU003623}; TaxID=1287233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC221B00.;"
SCNpilot_expt_1000_bf_scaffold_13467_6
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2817..3287
DNA (471bp) protein (157aa)
30S ribosomal protein S7 n=10 Tax=Mesorhizobium RepID=E8TMC0_MESCW rbh
30S ribosomal protein S7 {ECO:0000256|HAMAP-Rule:MF_00480}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
ribosomal protein S7, bacterial/organelle rbh
SCNpilot_expt_1000_bf_scaffold_13467_7
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3317..4969
DNA (1653bp) protein (551aa)
PREDICTED: elongation factor G, chloroplastic-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C1197F
Elongation factor G {ECO:0000256|HAMAP-Rule:MF_00054}; Short=EF-G {ECO:0000256|HAMAP-Rule:MF_00054};; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
fusA; elongation factor G; K02355 elongation factor G
SCNpilot_expt_1000_bf_scaffold_13467_8
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4918..5397
DNA (480bp) protein (160aa)
Elongation factor G n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5F8C3_9RHIZ
Elongation factor G {ECO:0000256|HAMAP-Rule:MF_00054}; Short=EF-G {ECO:0000256|HAMAP-Rule:MF_00054};; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
translation elongation factor G; K02355 elongation factor G
SCNpilot_expt_1000_bf_scaffold_13467_9
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5500..5604
DNA (105bp) protein (35aa)
UPI0003CE0FB7 related cluster n=1 Tax=unknown RepID=UPI0003CE0FB7
translation elongation factor Tu; K02358 elongation factor Tu
Elongation factor Tu {ECO:0000255|HAMAP-Rule:MF_00118}; Short=EF-Tu {ECO:0000255|HAMAP-Rule:MF_00118};; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
Displaying 9 items

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