ggKbase home page

SCNpilot_expt_1000_bf_scaffold_13643

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_13643_1
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


2..1141
DNA (1140bp) protein (380aa)
UPI0003CF0D07 related cluster n=1 Tax=unknown RepID=UPI0003CF0D07
Signal recognition particle protein {ECO:0000256|HAMAP-Rule:MF_00306}; Fifty-four homolog {ECO:0000256|HAMAP-Rule:MF_00306}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
signal recognition particle protein; K03106 signal recognition particle subunit SRP54
SCNpilot_expt_1000_bf_scaffold_13643_2
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1153..1479
DNA (327bp) protein (109aa)
Monofunctional chorismate mutase n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KDV0_MESAW
Chorismate mutase {ECO:0000313|EMBL:AID34643.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
monofunctional chorismate mutase
SCNpilot_expt_1000_bf_scaffold_13643_3
Mesorhizobium opportunistum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


1550..1942
DNA (393bp) protein (131aa)
UPI0003CE583B related cluster n=1 Tax=unknown RepID=UPI0003CE583B
30S ribosomal protein S16; K02959 small subunit ribosomal protein S16
30S ribosomal protein S16 {ECO:0000256|HAMAP-Rule:MF_00385}; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075).;"
SCNpilot_expt_1000_bf_scaffold_13643_4
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2109..2348)
DNA (240bp) protein (80aa)
Membrane protein n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FD89_9RHIZ
Membrane protein {ECO:0000313|EMBL:ESW65587.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_13643_5
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2465..2992)
DNA (528bp) protein (176aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YB61_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CDX52611.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_13643_6
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3009..3419)
DNA (411bp) protein (137aa)
membrane protein n=1 Tax=Rhizobium loti RepID=UPI00036CE837
Uncharacterized protein {ECO:0000313|EMBL:CDX22582.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_13643_7
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3570..4475)
DNA (906bp) protein (302aa)
UPF0187 protein mll4386 n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Y4386_RHILO rbh
hypothetical protein; K08994 putative membrane protein rbh
UPF0187 protein mll4386; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
SCNpilot_expt_1000_bf_scaffold_13643_8
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4633..5007
DNA (375bp) protein (125aa)
Ribonuclease H family protein n=2 Tax=Mesorhizobium RepID=V7ERR5_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CDX41652.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
hypothetical protein; K09964 hypothetical protein
SCNpilot_expt_1000_bf_scaffold_13643_9
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5070..5411
DNA (342bp) protein (114aa)
alkylphosphonate utilization operon protein PhnA; K06193 phosphonoacetate hydrolase [EC:3.11.1.2]
Alkylphosphonate utilization protein PhnA n=1 Tax=Nitratireductor indicus C115 RepID=K2NL17_9RHIZ
Alkylphosphonate utilization protein PhnA {ECO:0000313|EMBL:EKF40090.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
SCNpilot_expt_1000_bf_scaffold_13643_10
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5645..6661)
DNA (1017bp) protein (339aa)
Aspartate-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121}; Short=ASA dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121};; Short=ASADH {ECO:0000256|HAMAP-Rule:MF_02121};; EC=1.2.1.11 {ECO:0000256|HAMAP-Rule:MF_02121};; Aspartate-beta-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
aspartate-semialdehyde dehydrogenase (EC:1.2.1.11); K00133 aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] rbh
UPI0003CF1937 related cluster n=1 Tax=unknown RepID=UPI0003CF1937 rbh
Displaying 10 items

View Taxonomy