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SCNpilot_expt_1000_bf_scaffold_4203

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_4203_1
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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234..1049
DNA (816bp) protein (272aa)
amino acid ABC transporter ATP-binding protein; K02028 polar amino acid transport system ATP-binding protein [EC:3.6.3.21] rbh
Amino acid ABC transporter, ATP-binding protein n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YEC0_9RHIZ rbh
Amino acid ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EHH09934.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
SCNpilot_expt_1000_bf_scaffold_4203_2
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1106..1903
DNA (798bp) protein (266aa)
amino acid ABC transporter n=1 Tax=Rhizobium loti RepID=UPI0003644A89 rbh
amino acid ABC transporter binding protein; K02030 polar amino acid transport system substrate-binding protein rbh
Amino acid ABC transporter, binding protein {ECO:0000313|EMBL:BAB51691.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
SCNpilot_expt_1000_bf_scaffold_4203_3
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2188..2880
DNA (693bp) protein (231aa)
Polar amino acid ABC transporter, inner membrane subunit n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8T9B7_MESCW rbh
Histidine/lysine/arginine/ornithine transporter subunit membrane component of ABC superfamily {ECO:0000313|EMBL:CDX42152.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
polar amino acid ABC transporter inner membrane subunit; K02029 polar amino acid transport system permease protein rbh
SCNpilot_expt_1000_bf_scaffold_4203_4
Mesorhizobium australicum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2880..3686
DNA (807bp) protein (269aa)
Amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KEJ9_MESAW rbh
amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family rbh
Amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family {ECO:0000313|EMBL:AGB42789.1}; TaxID=754035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073).;"
SCNpilot_expt_1000_bf_scaffold_4203_5
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3875..4876
DNA (1002bp) protein (334aa)
UPI0003CF33A9 related cluster n=1 Tax=unknown RepID=UPI0003CF33A9 rbh
Uncharacterized protein {ECO:0000313|EMBL:CDX40953.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
malate dehydrogenase rbh
SCNpilot_expt_1000_bf_scaffold_4203_6
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5253..5705
DNA (453bp) protein (151aa)
UPI0003D04E64 related cluster n=1 Tax=unknown RepID=UPI0003D04E64
DoxX family protein {ECO:0000313|EMBL:ESZ25789.1}; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C084A000.;"
DoxX family protein; K15977 putative oxidoreductase
SCNpilot_expt_1000_bf_scaffold_4203_7
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5821..6795
DNA (975bp) protein (325aa)
NAD-dependent epimerase/dehydratase; K00329 NADH dehydrogenase [EC:1.6.5.3]; K00356 NADH dehydrogenase [EC:1.6.99.3] rbh
UPI0003D061CA related cluster n=1 Tax=unknown RepID=UPI0003D061CA rbh
3-beta-hydroxy-delta(5)-steroid dehydrogenase {ECO:0000313|EMBL:ESZ25788.1}; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C084A000.;"
SCNpilot_expt_1000_bf_scaffold_4203_8
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6937..8202)
DNA (1266bp) protein (422aa)
Uncharacterized protein n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EUZ4_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:CCV03536.1}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans STM 2683.;"
cytochrome P450 rbh
SCNpilot_expt_1000_bf_scaffold_4203_9
Mesorhizobium sp. LNHC221B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8537..9088
DNA (552bp) protein (184aa)
UPI0003CE7EA6 related cluster n=1 Tax=unknown RepID=UPI0003CE7EA6
NADPH-dependent FMN reductase {ECO:0000313|EMBL:ESY83633.1}; TaxID=1287233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC221B00.;"
NADPH-dependent FMN reductase
SCNpilot_expt_1000_bf_scaffold_4203_10
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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9253..11724
DNA (2472bp) protein (824aa)
DNA gyrase subunit B {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363};; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
gyrB; DNA gyrase subunit B; K02470 DNA gyrase subunit B [EC:5.99.1.3] rbh
DNA gyrase subunit B n=1 Tax=Rhizobium loti RepID=UPI000360F938 rbh
SCNpilot_expt_1000_bf_scaffold_4203_11
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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12061..13239
DNA (1179bp) protein (393aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000373F489 rbh
Uncharacterized protein {ECO:0000313|EMBL:ESW68729.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_4203_12
unknown

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14010..14177
DNA (168bp) protein (56aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI0003608B98
SCNpilot_expt_1000_bf_scaffold_4203_13

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14601..14933
DNA (333bp) protein (111aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00036CCB22
Marine sediment metagenome DNA, contig: S01H1_S13449 {ECO:0000313|EMBL:GAG05938.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
potC; polyamine transport protein PotC
SCNpilot_expt_1000_bf_scaffold_4203_14
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

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15477..15965
DNA (489bp) protein (163aa)
spermidine/putrescine ABC transporter ATPase; K11072 spermidine/putrescine transport system ATP-binding protein [EC:3.6.3.31]
Spermidine/putrescine import ATP-binding protein PotA {ECO:0000256|HAMAP-Rule:MF_01726}; EC=3.6.3.31 {ECO:0000256|HAMAP-Rule:MF_01726};; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaerobacter thermophilus (strain DSM 20745 / S 6022).;"
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00036644EB
SCNpilot_expt_1000_bf_scaffold_4203_15
unknown

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15962..16033
DNA (72bp) protein (24aa)

This feature has no annotations

Displaying 15 items

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