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SCNpilot_expt_1000_bf_scaffold_4230

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_4230_1
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..484)
DNA (483bp) protein (161aa)
L-sorbosone dehydrogenase n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98DN9_RHILO
L-sorbosone dehydrogenase
L-sorbosone dehydrogenase {ECO:0000313|EMBL:BAB51231.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
SCNpilot_expt_1000_bf_scaffold_4230_2
Mesorhizobium australicum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(435..788)
DNA (354bp) protein (118aa)
Glucose/sorbosone dehydrogenase n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KG25_MESAW
glucose/sorbosone dehydrogenase
Glucose/sorbosone dehydrogenase {ECO:0000313|EMBL:AGB43319.1}; Flags: Precursor;; TaxID=754035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073).;"
SCNpilot_expt_1000_bf_scaffold_4230_3
Mesorhizobium sp. L2C066B000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(949..1146)
DNA (198bp) protein (66aa)
Uncharacterized protein n=5 Tax=Mesorhizobium RepID=V7ESC2_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ESZ36714.1}; TaxID=1287105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C066B000.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_4230_4
Mesorhizobium australicum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1220..2305)
DNA (1086bp) protein (362aa)
Heat-inducible transcription repressor hrcA n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KEA0_MESAW rbh
heat shock gene repressor HrcA rbh
Heat-inducible transcription repressor HrcA {ECO:0000256|HAMAP-Rule:MF_00081, ECO:0000256|SAAS:SAAS00101987}; TaxID=754035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073).;"
SCNpilot_expt_1000_bf_scaffold_4230_5
Mesorhizobium australicum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2477..3193
DNA (717bp) protein (239aa)
Ribonuclease PH {ECO:0000256|HAMAP-Rule:MF_00564, ECO:0000256|SAAS:SAAS00104182}; Short=RNase PH {ECO:0000256|HAMAP-Rule:MF_00564};; EC=2.7.7.56 {ECO:0000256|HAMAP-Rule:MF_00564, ECO:0000256|SAAS:SAAS00104188};; tRNA nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_00564}; TaxID=754035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073).;"
Ribonuclease PH n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KDG1_MESAW rbh
ribonuclease PH rbh
SCNpilot_expt_1000_bf_scaffold_4230_6
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3394..3804
DNA (411bp) protein (137aa)
Lactoylglutathione lyase n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YHY2_9RHIZ
Lactoylglutathione lyase {ECO:0000313|EMBL:CDX27571.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
lactoylglutathione lyase-like lyase
SCNpilot_expt_1000_bf_scaffold_4230_7
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4743..5627
DNA (885bp) protein (295aa)
oxygen-independent coproporphyrinogen III oxidase; K02495 oxygen-independent coproporphyrinogen III oxidase [EC:1.3.99.22]
Putative oxidoreductase n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EIF3_9RHIZ
Putative oxidoreductase {ECO:0000313|EMBL:CCV04172.1}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans STM 2683.;"
SCNpilot_expt_1000_bf_scaffold_4230_8
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5674..5994
DNA (321bp) protein (107aa)
Protein tyrosine phosphatase-like protein n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EX05_9RHIZ
Protein-tyrosine phosphatase, low molecular weight {ECO:0000313|EMBL:CDX63131.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
protein-tyrosine phosphatase, low molecular weight
SCNpilot_expt_1000_bf_scaffold_4230_9
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6081..6269)
DNA (189bp) protein (63aa)
hypothetical protein n=1 Tax=Rhizobium loti RepID=UPI0003671B16
Uncharacterized protein {ECO:0000313|EMBL:CDX35630.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_4230_10
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6311..7309
DNA (999bp) protein (333aa)
Ribosomal RNA small subunit methyltransferase I {ECO:0000256|HAMAP-Rule:MF_01877}; EC=2.1.1.198 {ECO:0000256|HAMAP-Rule:MF_01877};; 16S rRNA 2'-O-ribose C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01877}; rRNA (cytidine-2'-O-)-methyltransferase RsmI {ECO:0000256|HAMAP-Rule:MF_01877}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; K07056 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] rbh
Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YHX6_9RHIZ rbh
SCNpilot_expt_1000_bf_scaffold_4230_11
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7361..7738
DNA (378bp) protein (126aa)
UPI0003CECD2A related cluster n=1 Tax=unknown RepID=UPI0003CECD2A
UPF0102 protein MPLA_380015 {ECO:0000256|HAMAP-Rule:MF_00048}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
putative endonuclease related to Holliday junction resolvase
SCNpilot_expt_1000_bf_scaffold_4230_12
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7826..8632)
DNA (807bp) protein (269aa)
Undecaprenyl-diphosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; EC=3.6.1.27 {ECO:0000256|HAMAP-Rule:MF_01006};; Bacitracin resistance protein {ECO:0000256|HAMAP-Rule:MF_01006}; Undecaprenyl pyrophosphate phosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
UDP pyrophosphate phosphatase n=1 Tax=Rhizobium loti RepID=UPI00036E2F1F rbh
undecaprenyl-diphosphatase UppP rbh
SCNpilot_expt_1000_bf_scaffold_4230_13
Mesorhizobium australicum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8893..9585
DNA (693bp) protein (231aa)
Glutathione S-transferase n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KD52_MESAW rbh
glutathione S-transferase rbh
Glutathione S-transferase {ECO:0000313|EMBL:AGB43242.1}; TaxID=754035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073).;"
SCNpilot_expt_1000_bf_scaffold_4230_14
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9566..10720
DNA (1155bp) protein (385aa)
Epoxyqueuosine reductase {ECO:0000256|HAMAP-Rule:MF_00916}; EC=1.17.99.6 {ECO:0000256|HAMAP-Rule:MF_00916};; Queuosine biosynthesis protein QueG {ECO:0000256|HAMAP-Rule:MF_00916}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
UPI0003CF673F related cluster n=1 Tax=unknown RepID=UPI0003CF673F rbh
hypothetical protein rbh
SCNpilot_expt_1000_bf_scaffold_4230_15
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10717..11643
DNA (927bp) protein (309aa)
UPI0003CED914 related cluster n=1 Tax=unknown RepID=UPI0003CED914 rbh
Uncharacterized protein {ECO:0000313|EMBL:CDX41241.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
NAD-dependent epimerase/dehydratase rbh
Displaying 15 items

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