ggKbase home page

SCNpilot_expt_1000_bf_scaffold_4338

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_4338_1
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(90..245)
DNA (156bp) protein (52aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FDK8_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CCV14248.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_4338_2
Mesorhizobium sp. LNHC252B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1155..1565)
DNA (411bp) protein (137aa)
UPI0003CF5364 related cluster n=1 Tax=unknown RepID=UPI0003CF5364
Uncharacterized protein {ECO:0000313|EMBL:ESY72240.1}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_4338_3
Mesorhizobium sp. LNHC232B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1672..2985)
DNA (1314bp) protein (438aa)
Homoserine dehydrogenase {ECO:0000256|RuleBase:RU000579}; EC=1.1.1.3 {ECO:0000256|RuleBase:RU000579};; TaxID=1287243 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC232B00.;"
homoserine dehydrogenase; K00003 homoserine dehydrogenase [EC:1.1.1.3] rbh
UPI0003CF00AD related cluster n=1 Tax=unknown RepID=UPI0003CF00AD rbh
SCNpilot_expt_1000_bf_scaffold_4338_4
Mesorhizobium australicum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3137..4354)
DNA (1218bp) protein (406aa)
Aspartate/tyrosine/aromatic aminotransferase n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KPX8_MESAW rbh
aspartate/tyrosine/aromatic aminotransferase rbh
Aspartate/tyrosine/aromatic aminotransferase {ECO:0000313|EMBL:AGB46153.1}; TaxID=754035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073).;"
SCNpilot_expt_1000_bf_scaffold_4338_5
Mesorhizobium australicum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4400..4780)
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KL45_MESAW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB46152.1}; Flags: Precursor;; TaxID=754035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073).;"
SCNpilot_expt_1000_bf_scaffold_4338_6
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4878..6713
DNA (1836bp) protein (612aa)
poly-beta-hydroxybutyrate synthase; K03821 polyhydroxyalkanoate synthase [EC:2.3.1.-] rbh
Poly-beta-hydroxybutyrate synthase n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98LP5_RHILO rbh
Poly-beta-hydroxybutyrate synthase {ECO:0000313|EMBL:BAB48418.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
SCNpilot_expt_1000_bf_scaffold_4338_7
unknown

Not on your lists

comp(7418..7603)
DNA (186bp) protein (62aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_4338_8
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8019..8213
DNA (195bp) protein (65aa)
UPI0003D0579F related cluster n=1 Tax=unknown RepID=UPI0003D0579F
Peptidase M15A {ECO:0000313|EMBL:CDX12133.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
peptidase M15A
SCNpilot_expt_1000_bf_scaffold_4338_9
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9573..9890
DNA (318bp) protein (106aa)
hypothetical protein n=1 Tax=Rhizobium loti RepID=UPI0003704FC3
FMN-binding domain protein {ECO:0000313|EMBL:AID33578.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_4338_10
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10331..10633
DNA (303bp) protein (101aa)
Mll6620 protein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q988S2_RHILO
Uncharacterized protein {ECO:0000313|EMBL:CDX13579.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
thiamine biosynthesis lipoprotein; K03734 thiamine biosynthesis lipoprotein
SCNpilot_expt_1000_bf_scaffold_4338_11
Mesorhizobium sp. L103C105A0, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10630..12141
DNA (1512bp) protein (504aa)
UPI0003CFDD2C related cluster n=1 Tax=unknown RepID=UPI0003CFDD2C
Uncharacterized protein {ECO:0000313|EMBL:ESZ68744.1}; TaxID=1287074 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L103C105A0.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_4338_12
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12148..13413)
DNA (1266bp) protein (422aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=935547 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium loti R7A.;"
UPI0003D04774 related cluster n=1 Tax=unknown RepID=UPI0003D04774
two-component sensor protein
SCNpilot_expt_1000_bf_scaffold_4338_13
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13494..14159)
DNA (666bp) protein (222aa)
Two-component system, regulatory protein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q988S5_RHILO
two-component system, regulatory protein
Two-component system, regulatory protein {ECO:0000313|EMBL:BAB52872.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
SCNpilot_expt_1000_bf_scaffold_4338_14
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14156..14485)
DNA (330bp) protein (110aa)
Mlr6616 protein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q988S6_RHILO
hypothetical protein
Mlr6616 protein {ECO:0000313|EMBL:BAB52871.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
SCNpilot_expt_1000_bf_scaffold_4338_15
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14894..15250)
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6U8H0_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ENN88874.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_4338_16
Sinorhizobium medicae, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15433..15864)
DNA (432bp) protein (144aa)
cellulose synthesis protein n=1 Tax=Sinorhizobium medicae RepID=UPI00036C378C
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR63988.1}; Flags: Precursor;; TaxID=366394 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium medicae (strain WSM419) (Ensifer medicae).;"
Displaying 16 items

View Taxonomy