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SCNpilot_expt_1000_bf_scaffold_4380

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Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_4380_1
Mesorhizobium australicum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..676)
DNA (675bp) protein (225aa)
Choline dehydrogenase-like flavoprotein n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KJH2_MESAW
choline dehydrogenase-like flavoprotein
Choline dehydrogenase-like flavoprotein {ECO:0000313|EMBL:AGB44519.1}; TaxID=754035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073).;"
SCNpilot_expt_1000_bf_scaffold_4380_2
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(826..1497)
DNA (672bp) protein (224aa)
Transcriptional regulator n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q988D5_RHILO rbh
transcriptional regulator rbh
Transcriptional regulator {ECO:0000313|EMBL:ETA71411.1}; TaxID=935547 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium loti R7A.;"
SCNpilot_expt_1000_bf_scaffold_4380_3
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1685..2515
DNA (831bp) protein (277aa)
hydrolase n=1 Tax=Rhizobium loti RepID=UPI000375E99E rbh
Putative hydrolase or acyltransferase of alpha/beta superfamily {ECO:0000313|EMBL:ETA71412.1}; TaxID=935547 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium loti R7A.;"
hydrolase rbh
SCNpilot_expt_1000_bf_scaffold_4380_4
Mesorhizobium australicum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2559..3698
DNA (1140bp) protein (380aa)
2-polyprenyl-6-methoxyphenol hydroxylase-like oxidoreductase n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KGR4_MESAW rbh
2-polyprenyl-6-methoxyphenol hydroxylase-like oxidoreductase rbh
2-polyprenyl-6-methoxyphenol hydroxylase-like oxidoreductase {ECO:0000313|EMBL:AGB44522.1}; TaxID=754035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073).;"
SCNpilot_expt_1000_bf_scaffold_4380_5
Mesorhizobium australicum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3766..4356
DNA (591bp) protein (197aa)
Uncharacterized protein n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KKF5_MESAW rbh
Protein of unknown function (DUF1185) rbh
Uncharacterized protein {ECO:0000313|EMBL:AGB44523.1}; TaxID=754035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073).;"
SCNpilot_expt_1000_bf_scaffold_4380_6
Mesorhizobium sp. LNHC220B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4388..4846
DNA (459bp) protein (153aa)
Raf kinase inhibitor-like protein, YbhB/YbcL family n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KJH7_MESAW rbh
Raf kinase inhibitor-like protein, YbhB/YbcL family rbh
PEBP family protein {ECO:0000313|EMBL:ESY88650.1}; TaxID=1287232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC220B00.;"
SCNpilot_expt_1000_bf_scaffold_4380_7
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4919..5641
DNA (723bp) protein (241aa)
aldolase n=1 Tax=Rhizobium loti RepID=UPI00036A47F0 rbh
3-hydroxy-2-methylpyridine-4,5-dicarboxylic acid decarboxylase {ECO:0000313|EMBL:AID28246.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
ribulose-5-phosphate 4-epimerase-like epimerase or aldolase rbh
SCNpilot_expt_1000_bf_scaffold_4380_8
Pseudomonas putida, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5731..6639)
DNA (909bp) protein (303aa)
Uncharacterized protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6UWT4_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EJT86064.1}; TaxID=1218169 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas putida S11.;"
SCNpilot_expt_1000_bf_scaffold_4380_9
Mesorhizobium sp. LNHC229A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6873..7346
DNA (474bp) protein (158aa)
PREDICTED: choline dehydrogenase, mitochondrial-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C16460
choline dehydrogenase-like flavoprotein
Dehydrogenase {ECO:0000313|EMBL:ESY96199.1}; TaxID=1287240 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC229A00.;"
SCNpilot_expt_1000_bf_scaffold_4380_10
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7346..8275
DNA (930bp) protein (310aa)
3-hydroxybutyryl-CoA dehydrogenase (EC:1.1.1.157); K00074 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] rbh
3-hydroxybutyryl-CoA dehydrogenase n=1 Tax=Rhizobium loti RepID=UPI000381752B rbh
3-hydroxyacyl-CoA dehydrogenase {ECO:0000313|EMBL:ETA71418.1}; TaxID=935547 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium loti R7A.;"
SCNpilot_expt_1000_bf_scaffold_4380_11
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8391..9212
DNA (822bp) protein (274aa)
ABC transporter, ATP-binding protein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q988C7_RHILO rbh
ABC transporter ATP-binding protein; K02049 NitT/TauT family transport system ATP-binding protein rbh
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:BAB53023.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
SCNpilot_expt_1000_bf_scaffold_4380_12
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9209..10021
DNA (813bp) protein (271aa)
ABC transporter, permease protein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q988C6_RHILO rbh
ABC transporter permease; K02050 NitT/TauT family transport system permease protein rbh
ABC transporter, permease protein {ECO:0000313|EMBL:BAB53024.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
SCNpilot_expt_1000_bf_scaffold_4380_13
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10060..11040
DNA (981bp) protein (327aa)
hypothetical protein n=1 Tax=Rhizobium loti RepID=UPI00036FF168 rbh
Tat (Twin-arginine translocation) pathway signal sequence domain protein {ECO:0000313|EMBL:AID28251.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
hypothetical protein; K02051 NitT/TauT family transport system substrate-binding protein rbh
SCNpilot_expt_1000_bf_scaffold_4380_14
Mesorhizobium australicum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11075..11500)
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KHP3_MESAW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB44531.1}; Flags: Precursor;; TaxID=754035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073).;"
SCNpilot_expt_1000_bf_scaffold_4380_15
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11600..12628
DNA (1029bp) protein (343aa)
Mlr6801 protein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q988C3_RHILO rbh
hypothetical protein; K02058 simple sugar transport system substrate-binding protein rbh
Mlr6801 protein {ECO:0000313|EMBL:BAB53027.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
SCNpilot_expt_1000_bf_scaffold_4380_16
Mesorhizobium australicum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12706..14022
DNA (1317bp) protein (439aa)
ATPase component of uncharacterized ABC-type transporter n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KKG5_MESAW rbh
ATPase component of uncharacterized ABC-type transporter rbh
ATPase component of uncharacterized ABC-type transporter {ECO:0000313|EMBL:AGB44533.1}; TaxID=754035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073).;"
SCNpilot_expt_1000_bf_scaffold_4380_17
Mesorhizobium australicum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13980..14261
DNA (282bp) protein (94aa)
ATPase component of uncharacterized ABC-type transporter n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KKG5_MESAW
ATPase component of uncharacterized ABC-type transporter
ATPase component of uncharacterized ABC-type transporter {ECO:0000313|EMBL:AGB44533.1}; TaxID=754035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073).;"
SCNpilot_expt_1000_bf_scaffold_4380_18
Mesorhizobium sp. LNHC220B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14258..15355
DNA (1098bp) protein (366aa)
UPI0003CF8EEE related cluster n=1 Tax=unknown RepID=UPI0003CF8EEE rbh
ABC transporter permease {ECO:0000313|EMBL:ESY88660.1}; TaxID=1287232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC220B00.;"
inner-membrane translocator; K02057 simple sugar transport system permease protein rbh
SCNpilot_expt_1000_bf_scaffold_4380_19
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15359..16294
DNA (936bp) protein (312aa)
ABC transporter permease n=1 Tax=Rhizobium loti RepID=UPI00037B81AA rbh
Branched-chain amino acid transport system / permease component family protein {ECO:0000313|EMBL:AID28256.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
putative ABC-type transport system, permease component rbh
SCNpilot_expt_1000_bf_scaffold_4380_20
Mesorhizobium sp. LNHC229A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16342..17148
DNA (807bp) protein (269aa)
UPI0003CEB3E4 related cluster n=1 Tax=unknown RepID=UPI0003CEB3E4 rbh
Zn-dependent hydrolase, glyoxylase rbh
4-pyridoxolactonase {ECO:0000313|EMBL:ESY96189.1}; TaxID=1287240 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC229A00.;"
SCNpilot_expt_1000_bf_scaffold_4380_21
Mesorhizobium sp. LNHC229A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17175..18353
DNA (1179bp) protein (393aa)
UPI0003CF5214 related cluster n=1 Tax=unknown RepID=UPI0003CF5214 rbh
Aminotransferase {ECO:0000313|EMBL:ESY96188.1}; TaxID=1287240 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC229A00.;"
serine-pyruvate aminotransferase/archaeal aspartate aminotransferase rbh
SCNpilot_expt_1000_bf_scaffold_4380_22
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18393..19139
DNA (747bp) protein (249aa)
pyridoxal 4-dehydrogenase n=1 Tax=Rhizobium loti RepID=UPI0003741864 rbh
Uncharacterized protein {ECO:0000313|EMBL:ETA71430.1}; TaxID=935547 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium loti R7A.;"
dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein rbh
SCNpilot_expt_1000_bf_scaffold_4380_23
Mesorhizobium opportunistum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19275..19772)
DNA (498bp) protein (166aa)
FMN reductase; K00299 FMN reductase [EC:1.5.1.38]
FMN reductase n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7Y0C6_MESOW
FMN reductase {ECO:0000313|EMBL:AEH84764.1}; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075).;"
SCNpilot_expt_1000_bf_scaffold_4380_24
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19800..20954)
DNA (1155bp) protein (385aa)
Alkanesulfonate monooxygenase {ECO:0000256|SAAS:SAAS00023380}; EC=1.14.14.5 {ECO:0000256|SAAS:SAAS00023380};; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
alkanesulfonate monooxygenase; K04091 alkanesulfonate monooxygenase [EC:1.14.14.5] rbh
Alkanesulfonate monooxygenase,FMNH(2)-dependent n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FCU9_9RHIZ rbh
SCNpilot_expt_1000_bf_scaffold_4380_25
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20982..21827)
DNA (846bp) protein (282aa)
Taurine transporter subunit membrane component of ABC superfamily n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FCN1_9RHIZ rbh
Taurine transporter subunit membrane component of ABC superfamily {ECO:0000313|EMBL:CDX37906.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
putative taurine ABC transporter, permease protein TauC rbh
SCNpilot_expt_1000_bf_scaffold_4380_26
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21824..22612)
DNA (789bp) protein (263aa)
tauB; sulfonate/nitrate/taurine transport system ATP-binding protein; K10831 taurine transport system ATP-binding protein [EC:3.6.3.36]
PREDICTED: probable sulfate/thiosulfate import ATP-binding protein CysA-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C19A09 rbh
Taurine transporter subunit ATP-binding component of ABC superfamily {ECO:0000313|EMBL:CDX51532.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
SCNpilot_expt_1000_bf_scaffold_4380_27
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22673..23683)
DNA (1011bp) protein (337aa)
Taurine transporter subunit periplasmic-binding component of ABC superfamily n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FDD3_9RHIZ rbh
Taurine transporter subunit periplasmic-binding component of ABC superfamily {ECO:0000313|EMBL:CDX62651.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
tauA; sulfonate/nitrate/taurine transport system substrate-binding protein; K15551 taurine transport system substrate-binding protein rbh
SCNpilot_expt_1000_bf_scaffold_4380_28
Vibrio nigripulchritudo, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23856..24725)
DNA (870bp) protein (290aa)
Putative Transcriptional regulator n=6 Tax=Vibrio nigripulchritudo RepID=U4KDX9_9VIBR
putative Transcriptional regulator
Putative Transcriptional regulator {ECO:0000313|EMBL:CCO61286.1}; TaxID=28173 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" source="Vibrio nigripulchritudo.;"
SCNpilot_expt_1000_bf_scaffold_4380_29
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24878..25828
DNA (951bp) protein (317aa)
ABC sugar transporter, periplasmic ligand binding protein n=4 Tax=Burkholderia multivorans RepID=B9B929_9BURK
RbsB {ECO:0000313|EMBL:EWY40292.1}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
simple sugar transporter substrate-binding protein; K10439 ribose transport system substrate-binding protein
SCNpilot_expt_1000_bf_scaffold_4380_30
Bacillus simplex, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

25911..26555
DNA (645bp) protein (215aa)
fructose-1,6-bisphosphate aldolase, class II (EC:4.1.2.29); K01624 fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
Putative uncharacterized protein n=1 Tax=Collinsella tanakaei YIT 12063 RepID=G1WHE9_9ACTN
Fructose-bisphosphate aldolase {ECO:0000313|EMBL:CEG24932.1}; TaxID=1478 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus simplex.;"
Displaying items 1-30 of 32 in total

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