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SCNpilot_expt_1000_bf_scaffold_4424

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_4424_1
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..198
DNA (198bp) protein (66aa)
Stress responsive alpha-beta barrel domain protein n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FBB9_9RHIZ
Stress responsive alpha-beta barrel domain protein {ECO:0000313|EMBL:CCV13601.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
Stress responsive alpha-beta barrel domain-containing protein
SCNpilot_expt_1000_bf_scaffold_4424_2
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1140..1976
DNA (837bp) protein (279aa)
2-dehydro-3-deoxyphosphooctonate aldolase {ECO:0000256|HAMAP-Rule:MF_00056, ECO:0000256|SAAS:SAAS00078566}; EC=2.5.1.55 {ECO:0000256|HAMAP-Rule:MF_00056, ECO:0000256|SAAS:SAAS00078538};; 3-deoxy-D-manno-octulosonic acid 8-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00056}; KDO-8-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00056}; Phospho-2-dehydro-3-deoxyoctonate aldolase {ECO:0000256|HAMAP-Rule:MF_00056}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriac
2-dehydro-3-deoxyphosphooctonate aldolase (EC:2.5.1.55); K01627 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] rbh
UPI0003CE2759 related cluster n=1 Tax=unknown RepID=UPI0003CE2759 rbh
SCNpilot_expt_1000_bf_scaffold_4424_3
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2091..2294
DNA (204bp) protein (68aa)
hypothetical protein n=1 Tax=Rhizobium loti RepID=UPI000360E469
Uncharacterized protein {ECO:0000313|EMBL:AID29973.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_4424_4
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2377..2742
DNA (366bp) protein (122aa)
Mlr0376 protein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98MZ5_RHILO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ETA72992.1}; TaxID=935547 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium loti R7A.;"
SCNpilot_expt_1000_bf_scaffold_4424_5
unknown

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comp(2801..2968)
DNA (168bp) protein (56aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_4424_6
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3137..4411
DNA (1275bp) protein (425aa)
Enolase {ECO:0000256|HAMAP-Rule:MF_00318}; EC=4.2.1.11 {ECO:0000256|HAMAP-Rule:MF_00318};; 2-phospho-D-glycerate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00318}; 2-phosphoglycerate dehydratase {ECO:0000256|HAMAP-Rule:MF_00318}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
Enolase n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YI17_9RHIZ rbh
phosphopyruvate hydratase rbh
SCNpilot_expt_1000_bf_scaffold_4424_7
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4570..4893
DNA (324bp) protein (108aa)
Septum formation initiator n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TMJ1_MESCW
Septum formation initiator {ECO:0000313|EMBL:CDX35701.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
septum formation initiator
SCNpilot_expt_1000_bf_scaffold_4424_8
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5085..6125
DNA (1041bp) protein (347aa)
Pyruvate dehydrogenase E1 component subunit alpha {ECO:0000256|RuleBase:RU361139}; EC=1.2.4.1 {ECO:0000256|RuleBase:RU361139};; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha; K00161 pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] rbh
Pyruvate dehydrogenase E1 component, alpha subunit n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FBK7_9RHIZ rbh
SCNpilot_expt_1000_bf_scaffold_4424_9
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6140..7537
DNA (1398bp) protein (466aa)
transketolase; K00162 pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] rbh
Pyruvate dehydrogenase subunit beta {ECO:0000313|EMBL:ESZ24929.1}; EC=1.2.4.1 {ECO:0000313|EMBL:ESZ24929.1};; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C084A000.;"
UPI0003CFF36F related cluster n=1 Tax=unknown RepID=UPI0003CFF36F rbh
SCNpilot_expt_1000_bf_scaffold_4424_10
Rhizobium sp. UR51a, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7556..7708
DNA (153bp) protein (51aa)
aceF; dihydrolipoamide acetyltransferase (EC:2.3.1.12); K00627 pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase) [EC:2.3.1.12]
Acetyltransferase component of pyruvate dehydrogenase complex {ECO:0000256|RuleBase:RU361137}; EC=2.3.1.12 {ECO:0000256|RuleBase:RU361137};; TaxID=1604021 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. UR51a.;"
Branched-chain alpha-keto acid dehydrogenase subunit E2 n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HWC7_9RHIZ
Displaying 10 items

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