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SCNpilot_expt_1000_bf_scaffold_4648

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_4648_1
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..411)
DNA (411bp) protein (137aa)
homospermidine synthase (EC:2.5.1.44); K00808 homospermidine synthase [EC:2.5.1.44]
Homospermidine synthase {ECO:0000313|EMBL:CDX44130.1}; EC=2.5.1.44 {ECO:0000313|EMBL:CDX44130.1};; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
Homospermidine synthase n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TEV2_MESCW
SCNpilot_expt_1000_bf_scaffold_4648_2
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(562..1497)
DNA (936bp) protein (312aa)
Uncharacterized protein n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EMF8_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:CCV05512.1}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans STM 2683.;"
hypothetical protein rbh
SCNpilot_expt_1000_bf_scaffold_4648_3
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1545..2207)
DNA (663bp) protein (221aa)
hypothetical protein; K02619 4-amino-4-deoxychorismate lyase [EC:4.1.3.38] rbh
hypothetical protein n=1 Tax=Rhizobium loti RepID=UPI00037F99DD rbh
Mlr3007 protein {ECO:0000313|EMBL:BAB49997.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
SCNpilot_expt_1000_bf_scaffold_4648_4
Mesorhizobium opportunistum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2156..3301)
DNA (1146bp) protein (382aa)
para-aminobenzoate synthase subunit I; K01665 para-aminobenzoate synthetase component I [EC:2.6.1.85] rbh
UPI0003CF49D5 related cluster n=1 Tax=unknown RepID=UPI0003CF49D5 rbh
Para-aminobenzoate synthase, subunit I {ECO:0000313|EMBL:AEH86423.1}; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075).;"
SCNpilot_expt_1000_bf_scaffold_4648_5
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(3558..4325)
DNA (768bp) protein (256aa)
NADH dehydrogenase n=1 Tax=Rhizobium loti RepID=UPI000365F75D rbh
NADH dehydogenase-like protein rbh
50S ribosomal protein L21 {ECO:0000313|EMBL:AID32324.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
SCNpilot_expt_1000_bf_scaffold_4648_6
unknown

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4393..4656
DNA (264bp) protein (88aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_4648_7
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4703..6436)
DNA (1734bp) protein (578aa)
oligoendopeptidase; K08602 oligoendopeptidase F [EC:3.4.24.-] rbh
Oligoendopeptidase, pepF/M3 family n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TEV7_MESCW rbh
Oligoendopeptidase, pepF/M3 family {ECO:0000313|EMBL:ADV11048.1}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
SCNpilot_expt_1000_bf_scaffold_4648_8
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6679..8175
DNA (1497bp) protein (499aa)
UPI0003CFD6E3 related cluster n=1 Tax=unknown RepID=UPI0003CFD6E3 rbh
Fis family transcriptional regulator {ECO:0000313|EMBL:ESZ21250.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains rbh
SCNpilot_expt_1000_bf_scaffold_4648_9
Mesorhizobium australicum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8885..10528
DNA (1644bp) protein (548aa)
Uncharacterized protein n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KGE8_MESAW rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AGB44402.1}; Flags: Precursor;; TaxID=754035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073).;"
SCNpilot_expt_1000_bf_scaffold_4648_10
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10714..10890
DNA (177bp) protein (59aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y2C0_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CDX32004.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_4648_11
Mesorhizobium australicum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10955..11593)
DNA (639bp) protein (213aa)
Entner-Doudoroff aldolase n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KIP6_MESAW rbh
Entner-Doudoroff aldolase rbh
Entner-Doudoroff aldolase {ECO:0000313|EMBL:AGB44405.1}; TaxID=754035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073).;"
SCNpilot_expt_1000_bf_scaffold_4648_12
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12853..13389)
DNA (537bp) protein (179aa)
nucleotide pyrophosphatase n=1 Tax=Rhizobium loti RepID=UPI000367EC59
hypothetical protein
Type I phosphodiesterase / nucleotide pyrophosphatase family protein {ECO:0000313|EMBL:AID31495.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
SCNpilot_expt_1000_bf_scaffold_4648_13
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13428..14354)
DNA (927bp) protein (309aa)
Mlr2187 protein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98IY7_RHILO rbh
Type I phosphodiesterase / nucleotide pyrophosphatase family protein {ECO:0000313|EMBL:AID31495.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
hypothetical protein rbh
SCNpilot_expt_1000_bf_scaffold_4648_14
Mesorhizobium opportunistum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14809..15546
DNA (738bp) protein (246aa)
Uncharacterized protein n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7Y961_MESOW rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AEH86433.1}; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075).;"
SCNpilot_expt_1000_bf_scaffold_4648_15
Mesorhizobium sp. LNHC252B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15909..16676
DNA (768bp) protein (256aa)
UPI0003CDFBB9 related cluster n=1 Tax=unknown RepID=UPI0003CDFBB9 rbh
3-oxoacyl-ACP reductase {ECO:0000313|EMBL:ESY72467.1}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;"
oxidoreductase rbh
SCNpilot_expt_1000_bf_scaffold_4648_16
Mesorhizobium sp. LNHC232B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16803..17177)
DNA (375bp) protein (125aa)
UPI0003CF1D49 related cluster n=1 Tax=unknown RepID=UPI0003CF1D49
Uncharacterized protein {ECO:0000313|EMBL:ESY67510.1}; TaxID=1287243 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC232B00.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_4648_17
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17256..17519)
DNA (264bp) protein (88aa)
Class I and II aminotransferase n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y2B4_9RHIZ
Class I and II aminotransferase {ECO:0000313|EMBL:EHH14097.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
class I and II aminotransferase
SCNpilot_expt_1000_bf_scaffold_4648_18
unknown

Not on your lists

17848..18069
DNA (222bp) protein (74aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_4648_19
unknown

Not on your lists

18139..18261
DNA (123bp) protein (41aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_4648_20
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18264..18494
DNA (231bp) protein (77aa)
Uncharacterized protein {ECO:0000313|EMBL:AID32310.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
SCNpilot_expt_1000_bf_scaffold_4648_21
Mesorhizobium opportunistum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19364..20218
DNA (855bp) protein (285aa)
Cation diffusion facilitator family transporter n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7Y966_MESOW
cation diffusion facilitator family transporter; K03295 cation efflux system protein, CDF family
Cation diffusion facilitator family transporter {ECO:0000313|EMBL:AEH86438.1}; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075).;"
SCNpilot_expt_1000_bf_scaffold_4648_22
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20390..20596
DNA (207bp) protein (69aa)
hypothetical protein n=1 Tax=Rhizobium loti RepID=UPI00037261BD
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:AID32306.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
SCNpilot_expt_1000_bf_scaffold_4648_23
Mesorhizobium sp. LNHC232B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20598..21002
DNA (405bp) protein (135aa)
UPI0003CE2A09 related cluster n=1 Tax=unknown RepID=UPI0003CE2A09
NAD-dependent epimerase {ECO:0000313|EMBL:ESY67505.1}; TaxID=1287243 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC232B00.;"
nucleoside-diphosphate-sugar epimerase
SCNpilot_expt_1000_bf_scaffold_4648_24
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20975..21577
DNA (603bp) protein (201aa)
UPI0003CF0972 related cluster n=1 Tax=unknown RepID=UPI0003CF0972
NAD-dependent epimerase {ECO:0000313|EMBL:ESW90034.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
NAD-dependent epimerase/dehydratase
SCNpilot_expt_1000_bf_scaffold_4648_25
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21602..22819)
DNA (1218bp) protein (406aa)
High-affinity nickel-transporter n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TEX1_MESCW rbh
high-affinity nickel-transporter; K08970 nickel/cobalt exporter rbh
High-affinity nickel-transporter {ECO:0000313|EMBL:ADV11062.1}; Flags: Precursor;; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
SCNpilot_expt_1000_bf_scaffold_4648_26
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23121..23468)
DNA (348bp) protein (116aa)
hypothetical protein n=1 Tax=Rhizobium loti RepID=UPI000373D636
Uncharacterized protein {ECO:0000313|EMBL:AID32303.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
ABC-type uncharacterized transport system, periplasmic component
Displaying 26 items

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