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SCNpilot_expt_1000_bf_scaffold_4727

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_4727_1
Octadecabacter arcticus, Octadecabacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..605
DNA (603bp) protein (201aa)
4-hydroxy-2-oxovalerate aldolase (EC:4.1.3.39)
4-hydroxy-2-oxovalerate aldolase {ECO:0000256|HAMAP-Rule:MF_01656, ECO:0000256|SAAS:SAAS00035546}; Short=HOA {ECO:0000256|HAMAP-Rule:MF_01656};; EC=4.1.3.39 {ECO:0000256|HAMAP-Rule:MF_01656, ECO:0000256|SAAS:SAAS00035546};; 4-hydroxy-2-keto-pentanoic acid aldolase {ECO:0000256|HAMAP-Rule:MF_01656}; 4-hydroxy-2-oxopentanoate aldolase {ECO:0000256|HAMAP-Rule:MF_01656}; TaxID=391616 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Octadecabacter.;" source="Octadecabact
4-hydroxy-2-oxovalerate aldolase n=1 Tax=Octadecabacter arcticus 238 RepID=M9RIU8_9RHOB
SCNpilot_expt_1000_bf_scaffold_4727_2
Octadecabacter arcticus, Octadecabacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

665..2329
DNA (1665bp) protein (555aa)
ilvD3; dihydroxy-acid dehydratase2 (EC:4.2.1.9) rbh
Dihydroxy-acid dehydratase2 {ECO:0000313|EMBL:AGI72488.1}; EC=4.2.1.9 {ECO:0000313|EMBL:AGI72488.1};; TaxID=391616 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Octadecabacter.;" source="Octadecabacter arcticus 238.;"
Dihydroxy-acid dehydratase2 n=1 Tax=Octadecabacter arcticus 238 RepID=M9RL64_9RHOB rbh
SCNpilot_expt_1000_bf_scaffold_4727_3
Octadecabacter arcticus, Octadecabacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2329..3084
DNA (756bp) protein (252aa)
Short chain dehydrogenase n=1 Tax=Octadecabacter arcticus 238 RepID=M9RK02_9RHOB rbh
short chain dehydrogenase rbh
Short chain dehydrogenase {ECO:0000313|EMBL:AGI72487.1}; TaxID=391616 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Octadecabacter.;" source="Octadecabacter arcticus 238.;"
SCNpilot_expt_1000_bf_scaffold_4727_4
Octadecabacter arcticus, Octadecabacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3130..3582
DNA (453bp) protein (151aa)
Putative glyoxylase family protein n=1 Tax=Octadecabacter arcticus 238 RepID=M9RQ15_9RHOB
putative glyoxylase family protein
Putative glyoxylase family protein {ECO:0000313|EMBL:AGI72486.1}; TaxID=391616 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Octadecabacter.;" source="Octadecabacter arcticus 238.;"
SCNpilot_expt_1000_bf_scaffold_4727_5
Paracoccus aminophilus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3848..5890
DNA (2043bp) protein (681aa)
N-methylhydantoinase A (EC:3.5.2.14) rbh
N-methylhydantoinase A {ECO:0000313|EMBL:AGT10680.1}; EC=3.5.2.14 {ECO:0000313|EMBL:AGT10680.1};; TaxID=1367847 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus aminophilus JCM 7686.;"
N-methylhydantoinase A n=1 Tax=Paracoccus aminophilus JCM 7686 RepID=S5Y4L4_PARAH rbh
SCNpilot_expt_1000_bf_scaffold_4727_6
Paracoccus aminophilus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5887..7041
DNA (1155bp) protein (385aa)
N-methylhydantoinase B (EC:3.5.2.14) rbh
N-methylhydantoinase B {ECO:0000313|EMBL:AGT10681.1}; EC=3.5.2.14 {ECO:0000313|EMBL:AGT10681.1};; TaxID=1367847 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus aminophilus JCM 7686.;"
N-methylhydantoinase B n=1 Tax=Paracoccus aminophilus JCM 7686 RepID=S5YZP6_PARAH rbh
SCNpilot_expt_1000_bf_scaffold_4727_7
Paracoccus aminophilus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7038..7892
DNA (855bp) protein (285aa)
N-methylhydantoinase B (EC:3.5.2.14)
N-methylhydantoinase B {ECO:0000313|EMBL:AGT10681.1}; EC=3.5.2.14 {ECO:0000313|EMBL:AGT10681.1};; TaxID=1367847 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus aminophilus JCM 7686.;"
N-methylhydantoinase B n=1 Tax=Paracoccus aminophilus JCM 7686 RepID=S5YZP6_PARAH
SCNpilot_expt_1000_bf_scaffold_4727_8
Paracoccus aminophilus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7940..8803
DNA (864bp) protein (288aa)
3-mercaptopyruvate sulfurtransferase (EC:2.8.1.2) rbh
3-mercaptopyruvate sulfurtransferase n=1 Tax=Paracoccus aminophilus JCM 7686 RepID=S5XZG5_PARAH rbh
Sulfurtransferase {ECO:0000256|RuleBase:RU000507}; TaxID=1367847 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus aminophilus JCM 7686.;"
SCNpilot_expt_1000_bf_scaffold_4727_9
Paracoccus aminophilus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8800..10125
DNA (1326bp) protein (442aa)
dimethylglycine dehydrogenase (EC:1.5.8.4) rbh
Dimethylglycine dehydrogenase {ECO:0000313|EMBL:AGT10683.1}; EC=1.5.8.4 {ECO:0000313|EMBL:AGT10683.1};; TaxID=1367847 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus aminophilus JCM 7686.;"
Dimethylglycine dehydrogenase n=1 Tax=Paracoccus aminophilus JCM 7686 RepID=S5YGT7_PARAH rbh
SCNpilot_expt_1000_bf_scaffold_4727_10
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10143..10886
DNA (744bp) protein (248aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11EY7_MESSB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABG64038.1}; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
SCNpilot_expt_1000_bf_scaffold_4727_11
Paracoccus aminophilus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10926..12128)
DNA (1203bp) protein (401aa)
methionine-gamma-lyase (EC:4.4.1.11) rbh
Methionine-gamma-lyase {ECO:0000313|EMBL:AGT10667.1}; EC=4.4.1.11 {ECO:0000313|EMBL:AGT10667.1};; TaxID=1367847 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus aminophilus JCM 7686.;"
Methionine-gamma-lyase n=1 Tax=Paracoccus aminophilus JCM 7686 RepID=S5XZF0_PARAH rbh
SCNpilot_expt_1000_bf_scaffold_4727_12
Rhodobacter sphaeroides, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12180..12608)
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3) RepID=A4WXH7_RHOS5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABP72091.1}; TaxID=349102 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3).;"
SCNpilot_expt_1000_bf_scaffold_4727_13
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12605..14209)
DNA (1605bp) protein (535aa)
N-methylproline demethylase (Stahydrine utilization protein stcD) n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HUX9_9RHIZ
N-methylproline demethylase (Stahydrine utilization protein stcD) {ECO:0000313|EMBL:EHK55458.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
N-methylproline demethylase
SCNpilot_expt_1000_bf_scaffold_4727_14
Paracoccus aminophilus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14461..15210
DNA (750bp) protein (250aa)
short-chain dehydrogenase/reductase SDR (EC:1.1.1.100)
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:AGT10675.1}; EC=1.1.1.100 {ECO:0000313|EMBL:AGT10675.1};; TaxID=1367847 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus aminophilus JCM 7686.;"
Short-chain dehydrogenase/reductase SDR n=1 Tax=Paracoccus aminophilus JCM 7686 RepID=S5Y4L0_PARAH
SCNpilot_expt_1000_bf_scaffold_4727_15
Paracoccus aminophilus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15954..16811
DNA (858bp) protein (286aa)
FAD dependent oxidoreductase (EC:1.-.-.-) rbh
FAD dependent oxidoreductase {ECO:0000313|EMBL:AGT10668.1}; EC=1.-.-.- {ECO:0000313|EMBL:AGT10668.1};; TaxID=1367847 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus aminophilus JCM 7686.;"
FAD dependent oxidoreductase n=1 Tax=Paracoccus aminophilus JCM 7686 RepID=S5YGS5_PARAH rbh
SCNpilot_expt_1000_bf_scaffold_4727_16
Paracoccus aminophilus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16914..17732
DNA (819bp) protein (273aa)
Transcriptional regulator, IclR family n=1 Tax=Paracoccus aminophilus JCM 7686 RepID=S5XT65_PARAH
transcriptional regulator, IclR family
Transcriptional regulator, IclR family {ECO:0000313|EMBL:AGT10669.1}; TaxID=1367847 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus aminophilus JCM 7686.;"
SCNpilot_expt_1000_bf_scaffold_4727_17
Paracoccus aminophilus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17857..19047
DNA (1191bp) protein (397aa)
sarcosine oxidase (EC:1.5.3.1) rbh
Sarcosine oxidase {ECO:0000313|EMBL:AGT10679.1}; EC=1.5.3.1 {ECO:0000313|EMBL:AGT10679.1};; TaxID=1367847 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus aminophilus JCM 7686.;"
Sarcosine oxidase n=1 Tax=Paracoccus aminophilus JCM 7686 RepID=S5XT72_PARAH rbh
SCNpilot_expt_1000_bf_scaffold_4727_18
Paracoccus aminophilus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19106..19675)
DNA (570bp) protein (190aa)
glycine cleavage system T protein (aminomethyltransferase) (EC:2.1.2.10)
Glycine cleavage system T protein (Aminomethyltransferase) {ECO:0000313|EMBL:AGT10676.1}; EC=2.1.2.10 {ECO:0000313|EMBL:AGT10676.1};; TaxID=1367847 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus aminophilus JCM 7686.;"
Glycine cleavage system T protein (Aminomethyltransferase) n=1 Tax=Paracoccus aminophilus JCM 7686 RepID=S5YZP1_PARAH
SCNpilot_expt_1000_bf_scaffold_4727_19
Paracoccus aminophilus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19626..20297)
DNA (672bp) protein (224aa)
glycine cleavage system T protein (aminomethyltransferase) (EC:2.1.2.10)
Glycine cleavage system T protein (Aminomethyltransferase) {ECO:0000313|EMBL:AGT10676.1}; EC=2.1.2.10 {ECO:0000313|EMBL:AGT10676.1};; TaxID=1367847 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus aminophilus JCM 7686.;"
Glycine cleavage system T protein (Aminomethyltransferase) n=1 Tax=Paracoccus aminophilus JCM 7686 RepID=S5YZP1_PARAH
SCNpilot_expt_1000_bf_scaffold_4727_20
Paracoccus aminophilus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20482..21669
DNA (1188bp) protein (396aa)
glycine cleavage system T protein (aminomethyltransferase) (EC:2.1.2.10) rbh
Glycine cleavage system T protein (Aminomethyltransferase) {ECO:0000313|EMBL:AGT10676.1}; EC=2.1.2.10 {ECO:0000313|EMBL:AGT10676.1};; TaxID=1367847 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus aminophilus JCM 7686.;"
Glycine cleavage system T protein (Aminomethyltransferase) n=1 Tax=Paracoccus aminophilus JCM 7686 RepID=S5YZP1_PARAH rbh
SCNpilot_expt_1000_bf_scaffold_4727_21
unknown

Not on your lists

21713..21814
DNA (102bp) protein (34aa)

This feature has no annotations

Displaying 21 items

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