ggKbase home page

SCNpilot_expt_1000_bf_scaffold_7177

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_7177_1
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

76..435
DNA (360bp) protein (120aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5F073_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CCV10767.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_7177_2
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(521..2005)
DNA (1485bp) protein (495aa)
peptidase S8 n=1 Tax=Rhizobium loti RepID=UPI00036DD311 rbh
Peptidase S8 and S53 subtilisin kexin sedolisin {ECO:0000313|EMBL:CDX14791.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
peptidase S8 and S53 subtilisin kexin sedolisin rbh
SCNpilot_expt_1000_bf_scaffold_7177_3
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1995..2663)
DNA (669bp) protein (223aa)
Mll5117 protein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98CK0_RHILO rbh
hypothetical protein rbh
Mll5117 protein {ECO:0000313|EMBL:BAB51621.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
SCNpilot_expt_1000_bf_scaffold_7177_4
Mesorhizobium sp. L103C131B0, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2660..3286)
DNA (627bp) protein (209aa)
RNA polymerase sigma factor n=2 Tax=Mesorhizobium RepID=V7H9R8_9RHIZ rbh
RNA polymerase sigma factor {ECO:0000313|EMBL:ESZ47336.1}; TaxID=1287089 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L103C131B0.;"
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily rbh
SCNpilot_expt_1000_bf_scaffold_7177_5
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3407..4246)
DNA (840bp) protein (280aa)
UPI0003CFF3FC related cluster n=1 Tax=unknown RepID=UPI0003CFF3FC rbh
Type I phosphodiesterase/nucleotide pyrophosphatase {ECO:0000313|EMBL:CDX15171.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
putative AP superfamily protein rbh
SCNpilot_expt_1000_bf_scaffold_7177_6
Mesorhizobium australicum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4407..5213)
DNA (807bp) protein (269aa)
ABC-type dipeptide transport system, periplasmic component n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KCY6_MESAW
ABC-type dipeptide transport system, periplasmic component
ABC-type dipeptide transport system, periplasmic component {ECO:0000313|EMBL:AGB42851.1}; Flags: Precursor;; TaxID=754035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073).;"
SCNpilot_expt_1000_bf_scaffold_7177_7
unknown

Not on your lists

5324..6064
DNA (741bp) protein (247aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_7177_8
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6091..7746)
DNA (1656bp) protein (552aa)
ABC transporter, ATP-binding protein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98CJ6_RHILO rbh
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:CDX12447.1}; Putative peptide transport fused subunits of ABC superfamily: ATP-binding components {ECO:0000313|EMBL:CDX15165.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
ABC transporter ATP-binding protein; K02031 peptide/nickel transport system ATP-binding protein; K02032 peptide/nickel transport system ATP-binding protein rbh
SCNpilot_expt_1000_bf_scaffold_7177_9
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7746..8567)
DNA (822bp) protein (274aa)
UPI0003CEECF7 related cluster n=1 Tax=unknown RepID=UPI0003CEECF7
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:CDX15163.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
binding-protein-dependent transport system inner membrane protein; K02034 peptide/nickel transport system permease protein
SCNpilot_expt_1000_bf_scaffold_7177_10
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8626..9030)
DNA (405bp) protein (135aa)
ABC transporter permease n=1 Tax=Hoeflea sp. 108 RepID=UPI000369D41A
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:CDX41154.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
ABC-type dipeptide/oligopeptide/nickel transport system, permease component
Displaying 10 items

View Taxonomy