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SCNpilot_expt_1000_bf_scaffold_6218

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_6218_1
unknown

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1..2295
DNA (2295bp) protein (765aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_6218_2
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2356..2532)
DNA (177bp) protein (59aa)
Mlr2600 protein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98I26_RHILO
hypothetical protein
Mlr2600 protein {ECO:0000313|EMBL:BAB49690.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
SCNpilot_expt_1000_bf_scaffold_6218_3
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2493..2675)
DNA (183bp) protein (61aa)
HxlR family transcriptional regulator n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FLS2_9RHIZ
HxlR family transcriptional regulator {ECO:0000313|EMBL:ESZ18881.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
HxlR type helix-turn-helix-domain containing protein
SCNpilot_expt_1000_bf_scaffold_6218_4
Mesorhizobium sp. LNHC221B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2808..3413
DNA (606bp) protein (202aa)
UPI0003CF2E9A related cluster n=1 Tax=unknown RepID=UPI0003CF2E9A rbh
FMN reductase {ECO:0000313|EMBL:ESY76813.1}; TaxID=1287233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC221B00.;"
NADPH-dependent FMN reductase rbh
SCNpilot_expt_1000_bf_scaffold_6218_5
Herpetosiphon aurantiacus, Herpetosiphon, Herpetosiphonales, Chloroflexia, Chloroflexi, Bacteria

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3724..4188
DNA (465bp) protein (155aa)
Transcriptional regulator, AsnC family n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9B1S8_HERA2
AsnC family transcriptional regulator; K03718 Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA
Transcriptional regulator, AsnC family {ECO:0000313|EMBL:ABX05370.1}; TaxID=316274 species="Bacteria; Chloroflexi; Chloroflexia; Herpetosiphonales; Herpetosiphonaceae; Herpetosiphon.;" source="Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785).;"
SCNpilot_expt_1000_bf_scaffold_6218_6
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4216..5154
DNA (939bp) protein (313aa)
Sugar phosphate isomerase n=1 Tax=Caldanaerobacter subterraneus subsp. yonseiensis KB-1 RepID=U5CN24_THEYO
Xylose isomerase domain-containing protein {ECO:0000313|EMBL:AJC83387.1}; TaxID=1432049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli bv. phaseoli str. IE4803.;"
xylose isomerase
SCNpilot_expt_1000_bf_scaffold_6218_7
bacterium UASB14, Bacteria

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5202..6941
DNA (1740bp) protein (580aa)
ABC transporter-like protein n=1 Tax=SAR324 cluster bacterium JCVI-SC AAA005 RepID=UPI0002625B1D
Extracellular solute-binding protein, family 5 {ECO:0000313|EMBL:GAK54075.1}; TaxID=1499966 species="Bacteria.;" source="bacterium UASB14.;"
putative ABC transporter substrate binding protein
SCNpilot_expt_1000_bf_scaffold_6218_8
Caldilinea aerophila, Caldilinea, Caldilineales, Caldilineae, Chloroflexi, Bacteria

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7003..7707
DNA (705bp) protein (235aa)
Putative ABC transporter permease protein n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I7J2_CALAS
ABC transporter permease; K02033 peptide/nickel transport system permease protein
Putative ABC transporter permease protein {ECO:0000313|EMBL:BAM01230.1}; TaxID=926550 species="Bacteria; Chloroflexi; Caldilineae; Caldilineales; Caldilineaceae; Caldilinea.;" source="Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 /; STL-6-O1).;"
Displaying 8 items

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