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SCNpilot_expt_1000_bf_scaffold_2583

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_2583_1
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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12..719
DNA (708bp) protein (236aa)
membrane protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034CE3C1
Membrane protein {ECO:0000313|EMBL:KGI77413.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
integral membrane protein, YjbE family
SCNpilot_expt_1000_bf_scaffold_2583_2

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comp(927..1277)
DNA (351bp) protein (117aa)
Putative uncharacterized protein n=1 Tax=uncultured organism RepID=D8VMP5_9ZZZZ
Putative uncharacterized protein {ECO:0000313|EMBL:ACY24680.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_2583_3
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1312..2163)
DNA (852bp) protein (284aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WK44_9GAMM
hypothetical protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_expt_1000_bf_scaffold_2583_4

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comp(2246..4231)
DNA (1986bp) protein (662aa)
Peptidase S9 prolyl oligopeptidase active site domain protein n=1 Tax=mine drainage metagenome RepID=T1CBY4_9ZZZZ rbh
Peptidase S9 prolyl oligopeptidase active site domain protein {ECO:0000313|EMBL:EQD64105.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
peptidase S9 prolyl oligopeptidase rbh
SCNpilot_expt_1000_bf_scaffold_2583_5
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4321..6369
DNA (2049bp) protein (683aa)
2,4-dienoyl-CoA reductase {ECO:0000313|EMBL:KGI77414.1}; EC=1.3.1.34 {ECO:0000313|EMBL:KGI77414.1};; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
2,4-dienoyl-CoA reductase n=1 Tax=Rudaea cellulosilytica RepID=UPI0003627083
NADH:flavin oxidoreductase
SCNpilot_expt_1000_bf_scaffold_2583_6
Arenimonas metalli, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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6514..7959
DNA (1446bp) protein (482aa)
Uncharacterized protein {ECO:0000313|EMBL:KFN48103.1}; TaxID=1384056 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas metalli CF5-1.;"
Sigma 54-dependent transcriptional activator containing CheY-like receiver domain id=2521426 bin=GWF1_Xanthomonadales_69_6 species=Hahella chejuensis genus=Hahella taxon_order=Oceanospirillales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
response regulator NtrC
SCNpilot_expt_1000_bf_scaffold_2583_7
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7996..9414)
DNA (1419bp) protein (473aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VP93_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL89034.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
hypothetical protein rbh
SCNpilot_expt_1000_bf_scaffold_2583_8
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9445..9948)
DNA (504bp) protein (168aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI00030472E7
Uncharacterized protein {ECO:0000313|EMBL:AIF48656.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
Conserved exported protein of unknown function; putative lipoprotein
SCNpilot_expt_1000_bf_scaffold_2583_9
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9962..10294)
DNA (333bp) protein (111aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI0003479001
Peptidase C39 {ECO:0000313|EMBL:AHX13913.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
bacteriocin processing protein, peptidase c39 family, exported; K06992
SCNpilot_expt_1000_bf_scaffold_2583_10
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10622..10882)
DNA (261bp) protein (87aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI000348AF62
hypothetical protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
Displaying 10 items

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