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SCNpilot_expt_1000_bf_scaffold_2975

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_2975_1
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1..147
DNA (147bp) protein (49aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WW45_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIL88157.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
SCNpilot_expt_1000_bf_scaffold_2975_2
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

164..1450
DNA (1287bp) protein (429aa)
Tagatose-bisphosphate aldolase noncatalytic subunit n=1 Tax=Rhodanobacter denitrificans RepID=M4NHY3_9GAMM
tagatose-bisphosphate aldolase noncatalytic subunit
Tagatose-bisphosphate aldolase noncatalytic subunit {ECO:0000313|EMBL:AGG90489.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_expt_1000_bf_scaffold_2975_3
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1422..2594
DNA (1173bp) protein (391aa)
Tagatose-6-phosphate ketose/aldose isomerase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WN89_9GAMM
Stenotrophomonas maltophilia strain ZBG7B contig_43, whole genome shotgun sequence {ECO:0000313|EMBL:KIP85983.1}; TaxID=40324 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (Pseudomonas maltophilia) (Xanthomonas; maltophilia).;"
putative phosphosugar isomerase
SCNpilot_expt_1000_bf_scaffold_2975_4
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2591..3550
DNA (960bp) protein (320aa)
Putative N-acetylglucosamine kinase n=1 Tax=Rhodanobacter denitrificans RepID=M4NSL7_9GAMM
putative N-acetylglucosamine kinase
Putative N-acetylglucosamine kinase {ECO:0000313|EMBL:AGG90491.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_expt_1000_bf_scaffold_2975_5
unknown

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comp(4236..4400)
DNA (165bp) protein (55aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_2975_6
Scytonema millei, Scytonema, Nostocales, Cyanobacteria, Bacteria

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comp(4443..5426)
DNA (984bp) protein (328aa)
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI00036B6125 rbh
NADPH:quinone oxidoreductase {ECO:0000313|EMBL:KIF18422.1}; TaxID=1245923 species="Bacteria; Cyanobacteria; Nostocales; Scytonemataceae; Scytonema.;" source="Scytonema millei VB511283.;"
NADPH:quinone oxidoreductase
SCNpilot_expt_1000_bf_scaffold_2975_7
Burkholderia sp. Ch1-1, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5682..6578)
DNA (897bp) protein (299aa)
Putative hydrolase or acyltransferase of alpha/beta superfamily n=1 Tax=Burkholderia sp. Ch1-1 RepID=I2IJ51_9BURK rbh
Putative hydrolase or acyltransferase of alpha/beta superfamily {ECO:0000313|EMBL:EIF30753.1}; Flags: Precursor;; TaxID=243261 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. Ch1-1.;"
alpha/beta hydrolase rbh
SCNpilot_expt_1000_bf_scaffold_2975_8
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6651..7379)
DNA (729bp) protein (243aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4WTU2_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIM02884.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_2975_9
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7719..9131)
DNA (1413bp) protein (471aa)
hypothetical protein n=1 Tax=Sphingomonas wittichii RepID=UPI0002F057DD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ71120.1}; Flags: Precursor;; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
SCNpilot_expt_1000_bf_scaffold_2975_10
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9229..9747
DNA (519bp) protein (173aa)
MarR family protein n=1 Tax=Novosphingobium sp. Rr 2-17 RepID=I9WAM2_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EYR69072.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;"
putative transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_2975_11
Herbaspirillum sp. TSA66, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10167..10502
DNA (336bp) protein (112aa)
hypothetical protein n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI00037C21A1
Ethyl tert-butyl ether degradation protein EthD {ECO:0000313|EMBL:KIF79828.1}; TaxID=709839 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. TSA66.;"
ethyl tert-butyl ether degradation EthD
SCNpilot_expt_1000_bf_scaffold_2975_12
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10694..11677)
DNA (984bp) protein (328aa)
Transcriptional activator FtrA n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VJ88_9GAMM rbh
Transcriptional activator FtrA {ECO:0000313|EMBL:EIL87279.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
AraC family transcriptional regulator; K13633 AraC family transcriptional regulator, transcriptional activator FtrA rbh
SCNpilot_expt_1000_bf_scaffold_2975_13
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11767..12186
DNA (420bp) protein (140aa)
Rhodanese n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VJ89_9GAMM
Sulfurtransferase {ECO:0000256|RuleBase:RU000507}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
rhodanese
SCNpilot_expt_1000_bf_scaffold_2975_14
Streptomyces tsukubaensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12161..13606
DNA (1446bp) protein (482aa)
Uncharacterized protein n=1 Tax=Streptomyces tsukubaensis NRRL18488 RepID=I2N923_9ACTO rbh
Uncharacterized protein {ECO:0000313|EMBL:EIF93520.1}; TaxID=1114943 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces tsukubaensis NRRL18488.;"
hypothetical protein rbh
SCNpilot_expt_1000_bf_scaffold_2975_15
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13754..14077
DNA (324bp) protein (108aa)
putative acetyltransferase (EC:2.3.1.-)
N-acetyltransferase GCN5 n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VJ90_9GAMM
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_expt_1000_bf_scaffold_2975_16
Collimonas arenae, Collimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14408..14776
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Rhizobium fredii (strain HH103) RepID=G9AAZ1_RHIFH
Lactoylglutathione lyase-related lyase {ECO:0000313|EMBL:AIY39401.1}; TaxID=279058 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Collimonas.;" source="Collimonas arenae.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_2975_17
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15126..16154
DNA (1029bp) protein (343aa)
Patatin n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q217T6_RHOPB rbh
patatin; K07001 NTE family protein rbh
Patatin {ECO:0000313|EMBL:ABD87350.1}; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;"
Displaying 17 items

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