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SCNpilot_expt_1000_bf_scaffold_2976

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_2976_1
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..301)
DNA (300bp) protein (100aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00036E28AD
Fis family transcriptional regulator {ECO:0000313|EMBL:KJV36289.1}; TaxID=345309 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Luteibacter.;" source="Luteibacter yeojuensis.;"
response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains
SCNpilot_expt_1000_bf_scaffold_2976_2
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(866..1432)
DNA (567bp) protein (189aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI00031CB029
Uncharacterized protein {ECO:0000313|EMBL:KJV36288.1}; TaxID=345309 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Luteibacter.;" source="Luteibacter yeojuensis.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_2976_3
unknown

Not on your lists

comp(1484..1774)
DNA (291bp) protein (97aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_2976_4
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1774..2202)
DNA (429bp) protein (143aa)
Flagellar biosynthetic protein FliS n=1 Tax=Rhodanobacter denitrificans RepID=I4WQN6_9GAMM
flagellar biosynthetic protein FliS
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_expt_1000_bf_scaffold_2976_5
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2233..3648)
DNA (1416bp) protein (472aa)
Flagellar hook-associated protein 2 n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WRZ4_9GAMM rbh
Flagellar hook protein {ECO:0000313|EMBL:GAN45481.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
flagellar capping protein rbh
SCNpilot_expt_1000_bf_scaffold_2976_6
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3958..4698)
DNA (741bp) protein (247aa)
Flagellin domain-containing protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WRZ3_9GAMM
Flagellin domain-containing protein {ECO:0000313|EMBL:EIM02235.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
flagellin/flagellar hook associated protein
SCNpilot_expt_1000_bf_scaffold_2976_7
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4745..5383)
DNA (639bp) protein (213aa)
Flagellin domain-containing protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WRZ3_9GAMM
Flagellin domain-containing protein {ECO:0000313|EMBL:EIM02235.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
flagellin/flagellar hook associated protein
SCNpilot_expt_1000_bf_scaffold_2976_8
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5730..6917)
DNA (1188bp) protein (396aa)
Flagellar hook-associated protein 3 n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WRZ2_9GAMM rbh
Flagellar hook protein {ECO:0000313|EMBL:GAN45483.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
flagellar hook-associated protein 3 rbh
SCNpilot_expt_1000_bf_scaffold_2976_9
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6920..8779)
DNA (1860bp) protein (620aa)
Flagellar hook-associated protein FlgK n=1 Tax=Rhodanobacter denitrificans RepID=M4NR90_9GAMM rbh
flagellar hook-associated protein FlgK rbh
Flagellar hook-associated protein FlgK {ECO:0000313|EMBL:AGG90081.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_expt_1000_bf_scaffold_2976_10
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8807..9325)
DNA (519bp) protein (173aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI000346FD71
Flagellar rod assembly protein/muramidase FlgJ {ECO:0000313|EMBL:EIM02232.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
flagellar rod assembly protein/muramidase FlgJ
SCNpilot_expt_1000_bf_scaffold_2976_11
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9881..11011)
DNA (1131bp) protein (377aa)
Flagellar P-ring protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VYE3_9GAMM
Flagellar P-ring protein {ECO:0000256|HAMAP-Rule:MF_00416}; Basal body P-ring protein {ECO:0000256|HAMAP-Rule:MF_00416}; Flags: Precursor;; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
flagellar basal-body P-ring protein
SCNpilot_expt_1000_bf_scaffold_2976_12
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11011..11661)
DNA (651bp) protein (217aa)
Flagellar L-ring protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NGR4_9GAMM
Flagellar L-ring protein {ECO:0000256|HAMAP-Rule:MF_00415}; Basal body L-ring protein {ECO:0000256|HAMAP-Rule:MF_00415}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
flagellar basal body L-ring protein
SCNpilot_expt_1000_bf_scaffold_2976_13
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11837..12622)
DNA (786bp) protein (262aa)
Flagellar basal-body rod protein FlgG n=1 Tax=Rhodanobacter denitrificans RepID=M4NGL5_9GAMM
flagellar basal-body rod protein FlgG
Flagellar basal-body rod protein FlgG {ECO:0000313|EMBL:AGG90085.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_expt_1000_bf_scaffold_2976_14
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12688..13428)
DNA (741bp) protein (247aa)
Flagellar basal-body rod protein FlgF n=2 Tax=Rhodanobacter denitrificans RepID=M4NR97_9GAMM
Flagellar basal body rod protein FlgF {ECO:0000313|EMBL:GAN45488.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
flagellar basal-body rod protein FlgF
SCNpilot_expt_1000_bf_scaffold_2976_15
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13455..14675)
DNA (1221bp) protein (407aa)
Flagellar hook protein FlgE n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VYE7_9GAMM rbh
Flagellar hook protein FlgE {ECO:0000313|EMBL:GAN45489.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
flagellar hook-basal body protein rbh
SCNpilot_expt_1000_bf_scaffold_2976_16
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14931..15581)
DNA (651bp) protein (217aa)
Flagellar hook capping protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NK87_9GAMM
flagellar hook capping protein
Flagellar hook capping protein {ECO:0000313|EMBL:AGG90088.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_expt_1000_bf_scaffold_2976_17
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15587..16018)
DNA (432bp) protein (144aa)
flagellar basal body rod protein FlgC n=1 Tax=Dyella japonica RepID=UPI0002FBC5E8
Flagellar basal-body rod protein FlgC {ECO:0000256|RuleBase:RU362062}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
flagellar basal-body rod protein FlgC
SCNpilot_expt_1000_bf_scaffold_2976_18
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16018..16434)
DNA (417bp) protein (139aa)
Flagellar basal body rod protein FlgB n=1 Tax=Rhodanobacter denitrificans RepID=I4WQP9_9GAMM
Flagellar basal body rod protein FlgB {ECO:0000256|PIRNR:PIRNR002889}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
flagellar basal-body rod protein FlgB
SCNpilot_expt_1000_bf_scaffold_2976_19
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16600..17529)
DNA (930bp) protein (310aa)
Chemotaxis signal transduction protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NRA2_9GAMM
Chemotaxis protein {ECO:0000313|EMBL:KJV36274.1}; TaxID=345309 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Luteibacter.;" source="Luteibacter yeojuensis.;"
chemotaxis signal transduction protein
SCNpilot_expt_1000_bf_scaffold_2976_20
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17708..18739
DNA (1032bp) protein (344aa)
Methyl-accepting chemotaxis protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VYF2_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KJV36273.1}; TaxID=345309 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Luteibacter.;" source="Luteibacter yeojuensis.;"
methyl-accepting chemotaxis protein
Displaying 20 items

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