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SCNpilot_expt_1000_bf_scaffold_8210

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_8210_1
unknown

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comp(354..449)
DNA (96bp) protein (32aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_8210_2
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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512..1438
DNA (927bp) protein (309aa)
type II secretory protein GspE n=1 Tax=Dyella japonica RepID=UPI0003124CC9
General secretion pathway protein GspE {ECO:0000313|EMBL:GAN45262.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
type IV-A pilus assembly ATPase PilB
SCNpilot_expt_1000_bf_scaffold_8210_3
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1606..2877
DNA (1272bp) protein (424aa)
Type IV pilus biogenesis protein PilC n=1 Tax=mine drainage metagenome RepID=T1B5T3_9ZZZZ rbh
Type II secretory pathway protein {ECO:0000313|EMBL:KGI77255.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
type II secretory pathway, component PulF
SCNpilot_expt_1000_bf_scaffold_8210_4
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3015..3893
DNA (879bp) protein (293aa)
Type 4 prepilin-like proteins leader peptide-processing enzyme {ECO:0000256|RuleBase:RU003794}; EC=2.1.1.- {ECO:0000256|RuleBase:RU003794};; EC=3.4.23.43 {ECO:0000256|RuleBase:RU003794};; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
type 4 prepilin peptidase 1 (EC:3.4.23.43)
Type 4 prepilin-like proteins leader peptide-processing enzyme n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VMA8_9GAMM
SCNpilot_expt_1000_bf_scaffold_8210_5
Alistipes sp. CAG:268, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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3960..4862
DNA (903bp) protein (301aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00035E068F
Predicted membrane-associated metal-dependent hydrolase {ECO:0000313|EMBL:CDC98034.1}; TaxID=1262693 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:268.;"
Predicted membrane-associated, metal-dependent hydrolase
SCNpilot_expt_1000_bf_scaffold_8210_6
R_Burkholderiales_57_36, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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4837..5673
DNA (837bp) protein (279aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00035E068F
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Burkholderiales_57_36_curated
SCNpilot_expt_1000_bf_scaffold_8210_7
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5707..6327
DNA (621bp) protein (207aa)
Dephospho-CoA kinase {ECO:0000256|HAMAP-Rule:MF_00376}; EC=2.7.1.24 {ECO:0000256|HAMAP-Rule:MF_00376};; Dephosphocoenzyme A kinase {ECO:0000256|HAMAP-Rule:MF_00376}; TaxID=345309 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Luteibacter.;" source="Luteibacter yeojuensis.;"
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0002D9DCD1
dephospho-CoA kinase
SCNpilot_expt_1000_bf_scaffold_8210_8
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6410..7279)
DNA (870bp) protein (290aa)
thiamine monophosphate synthase; K03574 7,8-dihydro-8-oxoguanine triphosphatase [EC:3.6.1.-]
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VZF4_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL92595.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
Displaying 8 items

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