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SCNpilot_expt_1000_bf_scaffold_8409

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_8409_1
unknown

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2..193
DNA (192bp) protein (64aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_8409_2
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

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405..1892
DNA (1488bp) protein (496aa)
Uncharacterized protein n=1 Tax=Streptomyces roseochromogenes subsp. oscitans DS 12.976 RepID=V6KTY4_STRRC
multicopper oxidase, type 2
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
SCNpilot_expt_1000_bf_scaffold_8409_3
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2519..3469
DNA (951bp) protein (317aa)
cysteine synthase (EC:2.5.1.47)
Pyridoxal-5'-phosphate-dependent enzyme subunit beta n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VWA8_9GAMM
Pyridoxal-5'-phosphate-dependent enzyme subunit beta {ECO:0000313|EMBL:EIL91499.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
SCNpilot_expt_1000_bf_scaffold_8409_4
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

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3602..4072
DNA (471bp) protein (157aa)
Alkyl hydroperoxide reductase AhpD {ECO:0000256|SAAS:SAAS00088523}; EC=1.11.1.15 {ECO:0000256|SAAS:SAAS00088503};; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
alkylhydroperoxidase AhpD family core domain protein id=12556323 bin=CNBR_ACIDO species=Rhodanobacter denitrificans genus=Rhodanobacter taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
alkylhydroperoxidase AhpD family core domain protein
SCNpilot_expt_1000_bf_scaffold_8409_5
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4078..4494
DNA (417bp) protein (139aa)
Ribonucleotide reductase subunit alpha n=1 Tax=Rhodanobacter denitrificans RepID=I4WYJ6_9GAMM
Ribonucleotide reductase subunit alpha {ECO:0000313|EMBL:KGM53772.1}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_8409_6
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4705..5040)
DNA (336bp) protein (112aa)
methylated-DNA--protein-cysteine methyltransferase n=1 Tax=Dyella japonica RepID=UPI00037A55CF
Cysteine methyltransferase {ECO:0000313|EMBL:AIF47165.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
putative methylated DNA-protein cysteine methyltransferase
SCNpilot_expt_1000_bf_scaffold_8409_7

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5142..5798
DNA (657bp) protein (219aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=T0Z2Z5_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EQD42321.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_8409_8
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5805..6068)
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WY20_9GAMM
Membrane protein {ECO:0000313|EMBL:KGI77339.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_8409_9
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6065..6526)
DNA (462bp) protein (154aa)
23S rRNA Gm-2251 2'-O-methyltransferase (EC:2.1.1.-)
23S rRNA (guanosine-2''''-O-)-methyltransferase n=1 Tax=Dyella ginsengisoli RepID=UPI000347B5B0
23S rRNA methyltransferase {ECO:0000313|EMBL:KGI77340.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
Displaying 9 items

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