name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_1000_bf_scaffold_1809_1
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1..885)
|
3,4-dihydroxy-2-butanone 4-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00180}; Short=DHBP synthase {ECO:0000256|HAMAP-Rule:MF_00180};; EC=4.1.99.12 {ECO:0000256|HAMAP-Rule:MF_00180};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
3,4-dihydroxy-2-butanone 4-phosphate synthase (EC:4.1.2.- 3.5.4.25)
3,4-dihydroxy-2-butanone 4-phosphate synthase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WJ98_9GAMM
|
|
SCNpilot_expt_1000_bf_scaffold_1809_2
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(882..1547)
|
riboflavin synthase subunit alpha; K00793 riboflavin synthase [EC:2.5.1.9]
Riboflavin synthase, alpha subunit n=1 Tax=Frateuria aurantia (strain ATCC 33424 / DSM 6220 / NBRC 3245 / NCIMB 13370) RepID=H8L4A5_FRAAD
Riboflavin synthase subunit alpha {ECO:0000313|EMBL:GAN45801.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
|
|
SCNpilot_expt_1000_bf_scaffold_1809_3
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1903..2814)
|
LysR family transcriptional regulator n=1 Tax=Rhodanobacter denitrificans RepID=I4WZB3_9GAMM
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:AGG87940.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
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|
SCNpilot_expt_1000_bf_scaffold_1809_4
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
2904..3914
|
Alcohol dehydrogenase n=1 Tax=Rhodanobacter denitrificans RepID=I4WZB4_9GAMM
rbh
Zn-dependent oxidoreductase, NADPH:quinone reductase
rbh
Zn-dependent oxidoreductase, NADPH:quinone reductase {ECO:0000313|EMBL:AGG87939.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
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SCNpilot_expt_1000_bf_scaffold_1809_5
Myxococcus fulvus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
3926..4789
|
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI0003780782
Uncharacterized protein {ECO:0000313|EMBL:AKF86160.1}; TaxID=1334629 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus fulvus 124B02.;"
beta-lactamase
|
|
SCNpilot_expt_1000_bf_scaffold_1809_6
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4808..5611)
|
Oxidoreductase, gfo/idh/moca family protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VJ99_9GAMM
rbh
Oxidoreductase, gfo/idh/moca family protein {ECO:0000313|EMBL:EIL87290.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
oxidoreductase, gfo/idh/moca family
|
|
SCNpilot_expt_1000_bf_scaffold_1809_7
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(5813..7048)
|
5-amino-6-(5-phosphoribosylamino)uracil reductase (EC:3.5.4.26 1.1.1.193)
Riboflavin biosynthesis protein RibD n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VJ98_9GAMM
Riboflavin biosynthesis protein RibD {ECO:0000256|PIRNR:PIRNR006769}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
|
|
SCNpilot_expt_1000_bf_scaffold_1809_8
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(7247..7771)
|
Transcriptional repressor NrdR n=1 Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7UW95_PSEUP
Transcriptional repressor NrdR {ECO:0000256|HAMAP-Rule:MF_00440, ECO:0000256|SAAS:SAAS00087559}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
nrdR; transcriptional regulator NrdR; K07738 transcriptional repressor NrdR
|
|
SCNpilot_expt_1000_bf_scaffold_1809_9
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(7775..9043)
|
Serine hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00051}; Short=SHMT {ECO:0000256|HAMAP-Rule:MF_00051};; Short=Serine methylase {ECO:0000256|HAMAP-Rule:MF_00051};; EC=2.1.2.1 {ECO:0000256|HAMAP-Rule:MF_00051};; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
serine hydroxymethyltransferase n=1 Tax=Dyella ginsengisoli RepID=UPI00034898BC
|
|
SCNpilot_expt_1000_bf_scaffold_1809_10
RIFOXYA1_FULL_Xanthomonadales_68_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
9155..9895
|
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00037FF7F0
hypothetical protein
Tax=RIFOXYA1_FULL_Xanthomonadales_68_6_curated
|
|
SCNpilot_expt_1000_bf_scaffold_1809_11
RIFOXYA1_FULL_Xanthomonadales_68_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
9895..10224
|
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00037FF7F0
dienelactone hydrolase
Tax=RIFOXYA1_FULL_Xanthomonadales_68_6_curated
|
|
SCNpilot_expt_1000_bf_scaffold_1809_12
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(10250..12115)
|
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI0003713739
rbh
Membrane protein {ECO:0000313|EMBL:KGY24498.1}; TaxID=85698 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Alcaligenes xylosoxydans xylosoxydans (Achromobacter xylosoxidans).;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_1809_13
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
12646..14307
|
ABC transporter ATP-binding protein n=1 Tax=Dyella japonica RepID=UPI0002E45678
ABC transporter ATP-binding protein {ECO:0000313|EMBL:AIF49286.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
ATP-binding cassette protein, ChvD family
|
|
SCNpilot_expt_1000_bf_scaffold_1809_14
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
14515..15507
|
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0002D4D556
rbh
Beta-lactamase {ECO:0000313|EMBL:AIF49288.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
elaC; arylsulfatase precursor (aryl-sulfate sulfohydrolase) protein
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_1809_15
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(15518..16771)
|
Major facilitator superfamily MFS_1 n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02B92_SOLUE
rbh
major facilitator transporter
rbh
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
|
|
SCNpilot_expt_1000_bf_scaffold_1809_16 |
Not on your lists |
comp(16876..17355)
|
Ribosomal-protein-alanine acetyltransferase {ECO:0000313|EMBL:EQD63928.1}; EC=2.3.1.- {ECO:0000313|EMBL:EQD63928.1};; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
Ribosomal-protein-alanine acetyltransferase n=2 Tax=mine drainage metagenome RepID=T1B651_9ZZZZ
ribosomal-protein-alanine acetyltransferase
|
|
SCNpilot_expt_1000_bf_scaffold_1809_17
unknown
|
Not on your lists |
comp(17357..17827)
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_1809_18
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(17824..18642)
|
phosphatidylserine synthase (EC:2.7.8.8)
Phosphatidylserine synthase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WJK6_9GAMM
Phosphatidylserine synthase {ECO:0000313|EMBL:EIL99647.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
|
|
SCNpilot_expt_1000_bf_scaffold_1809_19
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
18783..19256
|
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI000313304A
Uncharacterized protein {ECO:0000313|EMBL:AIF49240.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
|
|
SCNpilot_expt_1000_bf_scaffold_1809_20
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
20065..21771
|
Proline--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01569, ECO:0000256|SAAS:SAAS00011671}; EC=6.1.1.15 {ECO:0000256|HAMAP-Rule:MF_01569, ECO:0000256|SAAS:SAAS00089874};; Prolyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01569}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Proline--tRNA ligase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VSD8_9GAMM
prolyl-tRNA synthetase, family II
|
|
SCNpilot_expt_1000_bf_scaffold_1809_21
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
21894..22205
|
histidine biosynthesis protein n=1 Tax=Dyella ginsengisoli RepID=UPI0003449E01
Histidine biosynthesis protein {ECO:0000313|EMBL:AHX14493.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
DNA-binding protein H-NS
|
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SCNpilot_expt_1000_bf_scaffold_1809_22
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(22379..23647)
|
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI0003462CBB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG87989.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
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|
SCNpilot_expt_1000_bf_scaffold_1809_23
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(23670..23840)
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Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WJL1_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL99652.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
membrane protein implicated in regulation of membrane protease activity
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SCNpilot_expt_1000_bf_scaffold_1809_24
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(23881..24093)
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Membrane protein implicated in regulation of membrane protease activity n=1 Tax=Rhodanobacter denitrificans RepID=I4WZ68_9GAMM
membrane protein implicated in regulation of membrane protease activity
Membrane protein implicated in regulation of membrane protease activity {ECO:0000313|EMBL:AGG87988.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
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SCNpilot_expt_1000_bf_scaffold_1809_25
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(24301..25236)
|
membrane protein n=1 Tax=Dyella ginsengisoli RepID=UPI000349DB9F
Membrane protein {ECO:0000313|EMBL:AHX12156.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
membrane protease subunit, stomatin/prohibitin
|
|
SCNpilot_expt_1000_bf_scaffold_1809_26
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(25309..26622)
|
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
histidine kinase n=1 Tax=Dyella japonica RepID=UPI00030B0AE6
HAMP domain-containing protein,histidine kinase
|
|
SCNpilot_expt_1000_bf_scaffold_1809_27
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(26840..27394)
|
Response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VSE9_9GAMM
Response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains {ECO:0000313|EMBL:EIL90140.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains
|
|
SCNpilot_expt_1000_bf_scaffold_1809_28
Sphingopyxis sp. LC81, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(28305..29039)
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GDSL family lipase n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CB16A
Lipolytic enzyme, G-D-S-L {ECO:0000313|EMBL:KGB53087.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC81.;"
lipase/acylhydrolase, GDSL family
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SCNpilot_expt_1000_bf_scaffold_1809_29
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(29394..30206)
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ABC transporter permease n=1 Tax=Rhodanobacter sp. 115 RepID=I4VKT1_9GAMM
ABC transporter permease {ECO:0000313|EMBL:EIL87822.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
hypothetical protein; K02004 putative ABC transport system permease protein
|