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SCNpilot_expt_1000_bf_scaffold_3812

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_3812_1
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2..406)
DNA (405bp) protein (135aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI0003477AB0
Glycine cleavage system regulatory protein {ECO:0000313|EMBL:KJV37020.1}; TaxID=345309 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Luteibacter.;" source="Luteibacter yeojuensis.;"
glycine cleavage system regulatory protein
SCNpilot_expt_1000_bf_scaffold_3812_2
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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515..1405
DNA (891bp) protein (297aa)
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086421}; Short=HTPA synthase {ECO:0000256|HAMAP-Rule:MF_00418};; EC=4.3.3.7 {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086421};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
dihydrodipicolinate synthase (EC:4.2.1.52)
4-hydroxy-tetrahydrodipicolinate synthase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W427_9GAMM
SCNpilot_expt_1000_bf_scaffold_3812_3
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1402..2028
DNA (627bp) protein (209aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4WAM7_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL96518.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_3812_4
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2095..2418)
DNA (324bp) protein (108aa)
Ferredoxin (Fragment) n=1 Tax=mine drainage metagenome RepID=T1AXX1_9ZZZZ
Ferredoxin {ECO:0000313|EMBL:GAN45917.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
4Fe-4S ferredoxin; K05524 ferredoxin
SCNpilot_expt_1000_bf_scaffold_3812_5
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2760..4148
DNA (1389bp) protein (463aa)
Poly(A) polymerase I n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WB20_9GAMM
Poly(A) polymerase {ECO:0000313|EMBL:GAN45916.1}; Flags: Fragment;; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
poly(A) polymerase
SCNpilot_expt_1000_bf_scaffold_3812_6
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

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4152..4640
DNA (489bp) protein (163aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI0003781EA0
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
SCNpilot_expt_1000_bf_scaffold_3812_7
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4830..5786
DNA (957bp) protein (319aa)
Riboflavin biosynthesis protein {ECO:0000256|PIRNR:PIRNR004491}; EC=2.7.1.26 {ECO:0000256|PIRNR:PIRNR004491};; EC=2.7.7.2 {ECO:0000256|PIRNR:PIRNR004491};; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
FMN adenylyltransferase (EC:2.7.1.26 2.7.7.2)
Riboflavin kinase n=2 Tax=Rhodanobacter denitrificans RepID=M4NKV0_9GAMM
SCNpilot_expt_1000_bf_scaffold_3812_8
R_Pseudomonadales_64_12, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6407..7594)
DNA (1188bp) protein (396aa)
Uncharacterized protein n=1 Tax=Sutterella sp. CAG:351 RepID=R7IGX4_9BURK
Tax=RIFCSPHIGHO2_01_FULL_Pseudomonadales_64_12_curated
SCNpilot_expt_1000_bf_scaffold_3812_9
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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8098..8403
DNA (306bp) protein (102aa)
Isoleucyl-tRNA synthetase (EC:6.1.1.5)
Isoleucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02002, ECO:0000256|SAAS:SAAS00106059}; EC=6.1.1.5 {ECO:0000256|HAMAP-Rule:MF_02002, ECO:0000256|SAAS:SAAS00106059};; Isoleucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02002}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Isoleucine--tRNA ligase n=1 Tax=Rhodanobacter denitrificans RepID=I4WTR3_9GAMM
Displaying 9 items

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