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SCNpilot_expt_1000_bf_scaffold_9107

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_9107_1
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1..1035)
DNA (1035bp) protein (345aa)
ankyrin n=1 Tax=Dyella japonica RepID=UPI000301D0A6
Ankyrin {ECO:0000313|EMBL:KGI76689.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
ankyrin repeat-containing protein
SCNpilot_expt_1000_bf_scaffold_9107_2

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1139..2500
DNA (1362bp) protein (454aa)
Membrane protein involved in aromatic hydrocarbon degradation n=2 Tax=mine drainage metagenome RepID=T1CD28_9ZZZZ rbh
Membrane protein involved in aromatic hydrocarbon degradation {ECO:0000313|EMBL:EQD64585.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
ompP1; outer membrane protein; K06076 long-chain fatty acid transport protein
SCNpilot_expt_1000_bf_scaffold_9107_3
unknown

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comp(2595..3197)
DNA (603bp) protein (201aa)
hypothetical protein n=1 Tax=Henriciella marina RepID=UPI00036E6286
SCNpilot_expt_1000_bf_scaffold_9107_4
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3194..4726)
DNA (1533bp) protein (511aa)
delta-1-pyrroline-5-carboxylate dehydrogenase (EC:1.5.1.12 1.5.99.8)
Delta-1-pyrroline-5-carboxylate dehydrogenase {ECO:0000313|EMBL:AGG87449.1}; EC=1.5.1.12 {ECO:0000313|EMBL:AGG87449.1};; EC=1.5.99.8 {ECO:0000313|EMBL:AGG87449.1};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00036B528F
SCNpilot_expt_1000_bf_scaffold_9107_5
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4693..6255)
DNA (1563bp) protein (521aa)
delta-1-pyrroline-5-carboxylate dehydrogenase (EC:1.5.1.12 1.5.99.8)
Bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase {ECO:0000313|EMBL:EIL93857.1}; EC=1.5.99.8 {ECO:0000313|EMBL:EIL93857.1};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase n=1 Tax=Rhodanobacter denitrificans RepID=I4WHY5_9GAMM
SCNpilot_expt_1000_bf_scaffold_9107_6
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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6330..6902
DNA (573bp) protein (191aa)
Integral membrane protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VQ89_9GAMM
Membrane protein {ECO:0000313|EMBL:GAN45546.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
integral membrane protein
SCNpilot_expt_1000_bf_scaffold_9107_7
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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7009..7989
DNA (981bp) protein (327aa)
Cytochrome c oxidase subunit 2 {ECO:0000256|RuleBase:RU004024}; EC=1.9.3.1 {ECO:0000256|RuleBase:RU004024};; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
cytochrome C oxidase, subunit II protein (EC:1.9.3.1); K02275 cytochrome c oxidase subunit II [EC:1.9.3.1]
Cytochrome c oxidase subunit II n=1 Tax=mine drainage metagenome RepID=T1B824_9ZZZZ
SCNpilot_expt_1000_bf_scaffold_9107_8
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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8041..9363
DNA (1323bp) protein (441aa)
Cytochrome c oxidase subunit I n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WHC9_9GAMM
cytochrome c oxidase, subunit I
Cytochrome c oxidase subunit I {ECO:0000313|EMBL:EIL98870.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Displaying 8 items

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