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SCNpilot_expt_1000_bf_scaffold_9663

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_9663_1
Nitrosomonas sp. AL212, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2..388)
DNA (387bp) protein (129aa)
Catalase {ECO:0000256|RuleBase:RU000498}; EC=1.11.1.6 {ECO:0000256|RuleBase:RU000498};; TaxID=153948 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas sp. AL212.;"
Catalase n=1 Tax=gamma proteobacterium HdN1 RepID=E1VIZ6_9GAMM
catalase
SCNpilot_expt_1000_bf_scaffold_9663_2
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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720..1499
DNA (780bp) protein (260aa)
putative oxidoreductase; K03366 (R,R)-butanediol dehydrogenase / diacetyl reductase [EC:1.1.1.4 1.1.1.303]
diacetyl reductase, partial n=1 Tax=Pseudochrobactrum sp. AO18b RepID=UPI0003B44049
Putative oxidoreductase {ECO:0000313|EMBL:BAH37289.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
SCNpilot_expt_1000_bf_scaffold_9663_3
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1748..2458)
DNA (711bp) protein (237aa)
Phenol hydroxylase n=1 Tax=Rhodanobacter sp. 115 RepID=I4VK93_9GAMM
Phenol hydroxylase {ECO:0000313|EMBL:GAN45597.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
flavodoxin reductase family protein
SCNpilot_expt_1000_bf_scaffold_9663_4
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3311..3685
DNA (375bp) protein (125aa)
Multidrug ABC transporter ATPase n=1 Tax=Rhodanobacter sp. 115 RepID=I4VK92_9GAMM
Multidrug ABC transporter ATPase {ECO:0000313|EMBL:EIL87633.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
ABC-type multidrug transport system, ATPase component
SCNpilot_expt_1000_bf_scaffold_9663_5
Frateuria aurantia, Frateuria, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3795..4526
DNA (732bp) protein (244aa)
ABC-type polysaccharide/polyol phosphate export systems, permease component n=1 Tax=Frateuria aurantia (strain ATCC 33424 / DSM 6220 / NBRC 3245 / NCIMB 13370) RepID=H8L2Z7_FRAAD
ABC-type polysaccharide/polyol phosphate export systems permease; K09686 antibiotic transport system permease protein
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=767434 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Frateuria.;" source="Frateuria aurantia (strain ATCC 33424 / DSM 6220 / NBRC 3245 / NCIMB; 13370) (Acetobacter aurantius).;"
SCNpilot_expt_1000_bf_scaffold_9663_6
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4523..5176
DNA (654bp) protein (218aa)
Uncharacterized protein (Fragment) n=1 Tax=Rhodanobacter sp. 115 RepID=I4VUX6_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:AHX14716.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
SCNpilot_expt_1000_bf_scaffold_9663_7
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5424..5927)
DNA (504bp) protein (168aa)
Methylated-DNA--protein-cysteine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00772}; EC=2.1.1.63 {ECO:0000256|HAMAP-Rule:MF_00772};; 6-O-methylguanine-DNA methyltransferase {ECO:0000256|HAMAP-Rule:MF_00772}; O-6-methylguanine-DNA-alkyltransferase {ECO:0000256|HAMAP-Rule:MF_00772}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000374F037
O-6-methylguanine DNA methyltransferase
SCNpilot_expt_1000_bf_scaffold_9663_8
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5933..6739)
DNA (807bp) protein (269aa)
tropinone reductase n=1 Tax=Dyella ginsengisoli RepID=UPI00034DE987
Tropinone reductase {ECO:0000313|EMBL:GAN45503.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein
SCNpilot_expt_1000_bf_scaffold_9663_9
unknown

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6958..7209
DNA (252bp) protein (84aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_9663_10
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7287..7883)
DNA (597bp) protein (199aa)
Opacity protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NAZ9_9GAMM
Autotransporter {ECO:0000313|EMBL:GAN45678.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
opacity protein
SCNpilot_expt_1000_bf_scaffold_9663_11
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated, Betaproteobacteria, Proteobacteria, Bacteria

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9237..10610
DNA (1374bp) protein (458aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000373B306 rbh
beta-galactosidase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated
SCNpilot_expt_1000_bf_scaffold_9663_12
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10733..11029)
DNA (297bp) protein (99aa)
Sugar ABC transporter permease n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VUF5_9GAMM
Sugar ABC transporter permease {ECO:0000313|EMBL:AHX15463.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
carbohydrate ABC transporter membrane protein 2, CUT1 family
Displaying 12 items

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