ggKbase home page

SCNpilot_expt_1000_bf_scaffold_4141

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_4141_1
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

132..626
DNA (495bp) protein (165aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000363FE5D
Poly (3-hydroxybutyrate) depolymerase {ECO:0000313|EMBL:KJV32026.1}; TaxID=345309 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Luteibacter.;" source="Luteibacter yeojuensis.;"
polyhydroxyalkonate synthesis repressor, PhaR
SCNpilot_expt_1000_bf_scaffold_4141_2
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

872..1450
DNA (579bp) protein (193aa)
3-oxoacyl-(acyl-carrier-protein) reductase (EC:1.1.1.100)
3-oxoacyl-ACP reductase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W048_9GAMM
3-oxoacyl-ACP reductase {ECO:0000313|EMBL:EIL92839.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
SCNpilot_expt_1000_bf_scaffold_4141_3
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1432..1845)
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4WVK1_9GAMM
cupin 2 barrel domain-containing protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_expt_1000_bf_scaffold_4141_4
Myxococcus fulvus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1905..3482)
DNA (1578bp) protein (526aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00037429BF rbh
Uncharacterized protein {ECO:0000313|EMBL:AKF86645.1}; TaxID=1334629 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus fulvus 124B02.;"
beta-lactamase domain-containing protein
SCNpilot_expt_1000_bf_scaffold_4141_5
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3634..4926)
DNA (1293bp) protein (431aa)
Argininosuccinate lyase {ECO:0000313|EMBL:EIM01586.1}; EC=4.3.2.1 {ECO:0000313|EMBL:EIM01586.1};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
argininosuccinate lyase n=1 Tax=Dyella ginsengisoli RepID=UPI0003458B22
argininosuccinate lyase
SCNpilot_expt_1000_bf_scaffold_4141_6
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5032..6024)
DNA (993bp) protein (331aa)
N-acetyl-gamma-glutamyl-phosphate reductase {ECO:0000256|SAAS:SAAS00137393}; EC=1.2.1.38 {ECO:0000256|SAAS:SAAS00137393};; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
N-acetyl-gamma-glutamyl-phosphate reductase (EC:1.2.1.38)
N-acetyl-gamma-glutamyl-phosphate reductase n=1 Tax=Rhodanobacter sp. 115 RepID=I4WVK3_9GAMM
SCNpilot_expt_1000_bf_scaffold_4141_7
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6021..7349)
DNA (1329bp) protein (443aa)
Acetylglutamate kinase {ECO:0000313|EMBL:EIM01584.1}; EC=2.7.2.8 {ECO:0000313|EMBL:EIM01584.1};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
N-acetylglutamate kinase (EC:2.7.2.8)
Acetylglutamate kinase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WQ42_9GAMM
SCNpilot_expt_1000_bf_scaffold_4141_8

Not on your lists

comp(7443..7748)
DNA (306bp) protein (102aa)
acetylornithine deacetylase/succinyldiaminopimelate desuccinylase-like deacylase (EC:3.5.1.-)
Peptidase M20 n=1 Tax=mine drainage metagenome RepID=T1A1M9_9ZZZZ
Peptidase M20 {ECO:0000313|EMBL:EQD54456.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
SCNpilot_expt_1000_bf_scaffold_4141_9
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8617..9579)
DNA (963bp) protein (321aa)
argininosuccinate synthase (EC:6.3.4.5)
argininosuccinate synthase n=1 Tax=Dyella ginsengisoli RepID=UPI000344FCE7
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_expt_1000_bf_scaffold_4141_10
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9896..10126)
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5U8_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL94839.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
putative redox protein, regulator of disulfide bond formation
Displaying 10 items

View Taxonomy