ggKbase home page

SCNpilot_expt_1000_bf_scaffold_4443

Search features with annotation key words

Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_4443_1
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..1524)
DNA (1524bp) protein (508aa)
putative metalloendopeptidase; K07386 putative endopeptidase [EC:3.4.24.-]
Putative metalloendopeptidase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5K9_9GAMM
Putative metalloendopeptidase {ECO:0000313|EMBL:EIL94750.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
SCNpilot_expt_1000_bf_scaffold_4443_2
Arenimonas oryziterrae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1716..3134
DNA (1419bp) protein (473aa)
beta-lactamase n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B59D34
Uncharacterized protein {ECO:0000313|EMBL:KFN41426.1}; TaxID=1121015 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas oryziterrae DSM 21050 = YC6267.;"
RNA-metabolising metallo-beta-lactamase; K07576 metallo-beta-lactamase family protein
SCNpilot_expt_1000_bf_scaffold_4443_3
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3124..3363)
DNA (240bp) protein (80aa)
translation initiation factor IF-1 n=1 Tax=Dyella japonica RepID=UPI0002FDA47B
Translation initiation factor IF-1 {ECO:0000256|HAMAP-Rule:MF_00075}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
translation initiation factor IF-1; K02518 translation initiation factor IF-1
SCNpilot_expt_1000_bf_scaffold_4443_4

Not on your lists

comp(3439..3747)
DNA (309bp) protein (103aa)
Putative polyhydroxyalkanoic acid system protein n=2 Tax=mine drainage metagenome RepID=T0ZK36_9ZZZZ
Putative polyhydroxyalkanoic acid system protein {ECO:0000313|EMBL:EQD30175.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
SCNpilot_expt_1000_bf_scaffold_4443_5
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3781..4530
DNA (750bp) protein (250aa)
FHA domain-containing protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4WEV6_9GAMM
FHA domain-containing protein {ECO:0000313|EMBL:EIL97997.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
FHA domain-containing protein
SCNpilot_expt_1000_bf_scaffold_4443_6
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4696..5781
DNA (1086bp) protein (362aa)
Phosphoserine aminotransferase {ECO:0000256|HAMAP-Rule:MF_00160}; EC=2.6.1.52 {ECO:0000256|HAMAP-Rule:MF_00160};; Phosphohydroxythreonine aminotransferase {ECO:0000256|HAMAP-Rule:MF_00160}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
phosphoserine aminotransferase apoenzyme (EC:2.6.1.52)
Phosphoserine aminotransferase n=1 Tax=Rhodanobacter sp. 115 RepID=I4VZ24_9GAMM
SCNpilot_expt_1000_bf_scaffold_4443_7
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5774..6697
DNA (924bp) protein (308aa)
Histidinol-phosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_01023}; EC=2.6.1.9 {ECO:0000256|HAMAP-Rule:MF_01023};; Imidazole acetol-phosphate transaminase {ECO:0000256|HAMAP-Rule:MF_01023}; TaxID=345309 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Luteibacter.;" source="Luteibacter yeojuensis.;"
histidinol-phosphate aminotransferase (EC:2.6.1.-); K00817 histidinol-phosphate aminotransferase [EC:2.6.1.9]
histidinol-phosphate aminotransferase n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B475DD
Displaying 7 items

View Taxonomy