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SCNpilot_expt_1000_bf_scaffold_4979

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Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_4979_1
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2..301)
DNA (300bp) protein (100aa)
DNA-directed DNA polymerase (EC:2.7.7.7); K03502 DNA polymerase V
DNA-directed DNA polymerase {ECO:0000313|EMBL:AEB84441.1}; EC=2.7.7.7 {ECO:0000313|EMBL:AEB84441.1};; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
DNA-directed DNA polymerase n=2 Tax=Alicycliphilus denitrificans RepID=E8TXF2_ALIDB
SCNpilot_expt_1000_bf_scaffold_4979_2
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(285..761)
DNA (477bp) protein (159aa)
peptidase s24/s26a/s26b, conserved region protein; K03503 DNA polymerase V [EC:3.4.21.-]
Peptidase S24/S26A/S26B, conserved region protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TXF1_ALIDB
Peptidase S24/S26A/S26B, conserved region {ECO:0000313|EMBL:AEB84440.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
SCNpilot_expt_1000_bf_scaffold_4979_3
unknown

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comp(898..1491)
DNA (594bp) protein (198aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_4979_4
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1652..2449)
DNA (798bp) protein (266aa)
Translation initiation factor IF-2 n=1 Tax=Rhodanobacter sp. 115 RepID=I4VI96_9GAMM
Translation initiation factor IF-2 {ECO:0000313|EMBL:EIL86937.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
infB; translation initiation factor IF-2; K02519 translation initiation factor IF-2
SCNpilot_expt_1000_bf_scaffold_4979_5
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2552..3232)
DNA (681bp) protein (227aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NE52_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG88999.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_expt_1000_bf_scaffold_4979_6
unknown

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comp(3324..3539)
DNA (216bp) protein (72aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_4979_7

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3548..4078
DNA (531bp) protein (177aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=T1ARU3_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EQD44760.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_4979_8
unknown

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4222..4476
DNA (255bp) protein (85aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_4979_9
Burkholderia sp. BT03, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4580..4903)
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Burkholderia sp. BT03 RepID=J3BWZ5_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EUC15722.1}; TaxID=1144309 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. BT03.;"
putative HicB family protein
SCNpilot_expt_1000_bf_scaffold_4979_10
Thauera phenylacetica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4989..5252)
DNA (264bp) protein (88aa)
Uncharacterized protein family UPF0150 n=1 Tax=Marichromatium purpuratum 984 RepID=F9U4R4_MARPU
Uncharacterized protein {ECO:0000313|EMBL:ENO97722.1}; TaxID=1234382 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera phenylacetica B4P.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_4979_11
unknown

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comp(5249..5422)
DNA (174bp) protein (58aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_4979_12
unknown

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5518..5700
DNA (183bp) protein (61aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_4979_13
unknown

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5747..5890
DNA (144bp) protein (48aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_4979_14
unknown

Not on your lists

5993..6319
DNA (327bp) protein (109aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_4979_15
unknown

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comp(6210..6452)
DNA (243bp) protein (81aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_4979_16
unknown

Not on your lists

comp(6449..6634)
DNA (186bp) protein (62aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_4979_17
unknown

Not on your lists

comp(6690..6986)
DNA (297bp) protein (99aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_4979_18
unknown

Not on your lists

comp(6995..7381)
DNA (387bp) protein (129aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_4979_19
unknown

Not on your lists

comp(7587..7751)
DNA (165bp) protein (55aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_4979_20
unknown

Not on your lists

comp(7875..8396)
DNA (522bp) protein (174aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_4979_21

Not on your lists

comp(8389..9468)
DNA (1080bp) protein (360aa)
Putative Rickettsia 17 kDa surface antigen n=1 Tax=mine drainage metagenome RepID=E6PNJ8_9ZZZZ
Putative Rickettsia 17 kDa surface antigen {ECO:0000313|EMBL:CBH96500.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
Putative lipoprotein pcp
SCNpilot_expt_1000_bf_scaffold_4979_22
unknown

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comp(9496..10176)
DNA (681bp) protein (227aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_4979_23
Burkholderia cenocepacia, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(10261..11820)
DNA (1560bp) protein (520aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI0003821EA1
YadA domain protein {ECO:0000313|EMBL:ACA93376.1}; TaxID=406425 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia cenocepacia (strain MC0-3).;"
Hep_Hag family protein
SCNpilot_expt_1000_bf_scaffold_4979_24
unknown

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11946..12131
DNA (186bp) protein (62aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_4979_25
Ralstonia mannitolilytica, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12128..12826)
DNA (699bp) protein (233aa)
hypothetical protein n=1 Tax=Thioalkalivibrio sp. ALgr3 RepID=UPI0003758A4E
Uncharacterized protein {ECO:0000313|EMBL:AJW47710.1}; TaxID=105219 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia mannitolilytica.;"
traG; sex pilus assembly and mating pair formation
Displaying 25 items

View Taxonomy