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SCNpilot_expt_1000_bf_scaffold_7021

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_7021_1
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1..303
DNA (303bp) protein (101aa)
17 kDa surface antigen n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VMP0_9GAMM
17 kDa surface antigen {ECO:0000313|EMBL:EIL88481.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
outer membrane lipoprotein
SCNpilot_expt_1000_bf_scaffold_7021_2
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(484..915)
DNA (432bp) protein (144aa)
Cell Wall Hydrolase n=2 Tax=Rhodanobacter denitrificans RepID=M4NPB3_9GAMM
Cell Wall Hydrolase
Cell Wall Hydrolase {ECO:0000313|EMBL:AGG89476.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_expt_1000_bf_scaffold_7021_3
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1265..2074)
DNA (810bp) protein (270aa)
Folate-binding protein YgfZ n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WPA3_9GAMM
Folate-binding protein YgfZ {ECO:0000313|EMBL:EIM01295.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
folate-binding protein YgfZ
SCNpilot_expt_1000_bf_scaffold_7021_4
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2588..3115
DNA (528bp) protein (176aa)
succinate dehydrogenase subunit C (EC:1.3.5.1)
Succinate dehydrogenase subunit C {ECO:0000313|EMBL:AGG87392.1}; EC=1.3.5.1 {ECO:0000313|EMBL:AGG87392.1};; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Succinate dehydrogenase, cytochrome b556 subunit n=1 Tax=Rhodanobacter denitrificans RepID=I4WX32_9GAMM
SCNpilot_expt_1000_bf_scaffold_7021_5
Pusillimonas sp. T7-7, Pusillimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3112..3423
DNA (312bp) protein (104aa)
Succinate dehydrogenase, hydrophobic membrane anchor protein, putative n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GTQ8_PUSST
succinate dehydrogenase, hydrophobic membrane anchor protein; K00242 succinate dehydrogenase membrane anchor subunit
Succinate dehydrogenase, hydrophobic membrane anchor protein, putative {ECO:0000313|EMBL:AEC21022.1}; TaxID=1007105 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Pusillimonas.;" source="Pusillimonas sp. (strain T7-7).;"
SCNpilot_expt_1000_bf_scaffold_7021_6
Pusillimonas sp. T7-7, Pusillimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3654..4190
DNA (537bp) protein (179aa)
succinate dehydrogenase flavoprotein subunit; K00239 succinate dehydrogenase flavoprotein subunit [EC:1.3.99.1]
Succinate dehydrogenase flavoprotein subunit {ECO:0000256|RuleBase:RU362051}; EC=1.3.5.1 {ECO:0000256|RuleBase:RU362051};; TaxID=1007105 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Pusillimonas.;" source="Pusillimonas sp. (strain T7-7).;"
Succinate dehydrogenase flavoprotein subunit n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GTQ9_PUSST
SCNpilot_expt_1000_bf_scaffold_7021_7
Pusillimonas sp. T7-7, Pusillimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5315..6094
DNA (780bp) protein (260aa)
succinate dehydrogenase iron-sulfur subunit; K00240 succinate dehydrogenase iron-sulfur subunit [EC:1.3.99.1] rbh
Succinate dehydrogenase iron-sulfur subunit {ECO:0000256|RuleBase:RU361237}; EC=1.3.5.1 {ECO:0000256|RuleBase:RU361237};; TaxID=1007105 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Pusillimonas.;" source="Pusillimonas sp. (strain T7-7).;"
Succinate dehydrogenase iron-sulfur subunit n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GTR0_PUSST rbh
SCNpilot_expt_1000_bf_scaffold_7021_8
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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6125..6385
DNA (261bp) protein (87aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W032_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL92823.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_7021_9
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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6382..6846
DNA (465bp) protein (155aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000363E70E
Uncharacterized protein {ECO:0000313|EMBL:KGI78136.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_7021_10
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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6973..8214
DNA (1242bp) protein (414aa)
Lipoprotein releasing system, transmembrane protein, LolC/E family n=1 Tax=Rhodanobacter denitrificans RepID=M4NHB7_9GAMM
Cell division protein FtsX {ECO:0000313|EMBL:KGI78137.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
lipoprotein releasing system, transmembrane protein, LolC/E family
SCNpilot_expt_1000_bf_scaffold_7021_11
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8207..9001
DNA (795bp) protein (265aa)
Lipoprotein-releasing system ATP-binding protein LolD {ECO:0000256|HAMAP-Rule:MF_01708, ECO:0000256|SAAS:SAAS00041694}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01708, ECO:0000256|SAAS:SAAS00041671};; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
ABC transporter n=1 Tax=Rudaea cellulosilytica RepID=UPI00037B8E4D
lipoprotein releasing system, ATP-binding protein
SCNpilot_expt_1000_bf_scaffold_7021_12
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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9009..10478
DNA (1470bp) protein (490aa)
DNA internalization-related competence protein ComEC/Rec2 n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WPB3_9GAMM
DNA internalization-related competence protein ComEC/Rec2 {ECO:0000313|EMBL:EIM01305.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
DNA internalization-related competence protein ComEC/Rec2
Displaying 12 items

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