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SCNpilot_expt_1000_bf_scaffold_7713

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_7713_1
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2..205)
DNA (204bp) protein (68aa)
DNA-directed DNA polymerase (EC:2.7.7.7); K03502 DNA polymerase V
UmuC protein n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8L8L1_9GAMM
UmuC protein {ECO:0000313|EMBL:EED37945.1}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;"
SCNpilot_expt_1000_bf_scaffold_7713_2

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comp(342..1052)
DNA (711bp) protein (237aa)
Transposition helper protein n=1 Tax=mine drainage metagenome RepID=T0XYY4_9ZZZZ rbh
Transposition helper protein {ECO:0000313|EMBL:EQD26098.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
IstB-like ATP binding protein rbh
SCNpilot_expt_1000_bf_scaffold_7713_3

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comp(1063..2595)
DNA (1533bp) protein (511aa)
Integrase catalytic subunit n=2 Tax=mine drainage metagenome RepID=T0Z1Y1_9ZZZZ rbh
Integrase catalytic subunit {ECO:0000313|EMBL:EQD38242.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
ista13; putative transposase for insertion sequence IS1162
SCNpilot_expt_1000_bf_scaffold_7713_4

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comp(2810..3064)
DNA (255bp) protein (85aa)
Uncharacterized protein (Fragment) n=1 Tax=mine drainage metagenome RepID=T1BBB2_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EQD70196.1}; Flags: Fragment;; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
SCNpilot_expt_1000_bf_scaffold_7713_5

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3111..3548
DNA (438bp) protein (146aa)
Transcriptional regulator, XRE family n=2 Tax=mine drainage metagenome RepID=T0YYV8_9ZZZZ
Transcriptional regulator, XRE family {ECO:0000313|EMBL:EQD38243.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
helix-turn-helix domain-containing protein
SCNpilot_expt_1000_bf_scaffold_7713_6
unknown

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3559..4143
DNA (585bp) protein (195aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_7713_7
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4510..4851
DNA (342bp) protein (114aa)
ArsR family transcriptional regulator n=1 Tax=mine drainage metagenome RepID=T0YUU2_9ZZZZ
ArsR family transcriptional regulator {ECO:0000313|EMBL:GAN45640.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
ArsR family transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_7713_8
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5230..5823
DNA (594bp) protein (198aa)
arsenate reductase; K03741 arsenate reductase [EC:1.20.4.1]
Protein-tyrosine phosphatase, low molecular weight n=2 Tax=mine drainage metagenome RepID=T1BSA2_9ZZZZ
Arsenate reductase {ECO:0000313|EMBL:GAN45638.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
SCNpilot_expt_1000_bf_scaffold_7713_9
Salinisphaera hydrothermalis, Salinisphaera, Salinisphaerales, Gammaproteobacteria, Proteobacteria, Bacteria

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5843..7162
DNA (1320bp) protein (440aa)
arylsulfatase n=1 Tax=Halomonas zhanjiangensis RepID=UPI000377D40E
Arsenical pump membrane protein {ECO:0000256|RuleBase:RU004993}; TaxID=1304275 species="Bacteria; Proteobacteria; Gammaproteobacteria; Salinisphaerales; Salinisphaeraceae; Salinisphaera.;" source="Salinisphaera hydrothermalis C41B8.;"
arsB; arsenite-antimonite efflux pump ArsB; K03893 arsenical pump membrane protein
SCNpilot_expt_1000_bf_scaffold_7713_10
Acidobacterium capsulatum, Acidobacterium, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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7817..8161
DNA (345bp) protein (115aa)
heavy metal translocating P-type ATPase (EC:3.6.3.-)
Heavy metal translocating P-type ATPase {ECO:0000313|EMBL:ACO32456.1}; EC=3.6.3.- {ECO:0000313|EMBL:ACO32456.1};; TaxID=240015 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Acidobacterium.;" source="Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670 /; NBRC 15755 / NCIMB 13165 / 161).;"
Heavy metal translocating P-type ATPase n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F4S8_ACIC5
Displaying 10 items

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