ggKbase home page

SCNpilot_expt_1000_bf_scaffold_21086

Search features with annotation key words

Displaying 4 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_21086_1
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..227)
DNA (225bp) protein (75aa)
CRISPR-associated endonuclease Cas1 {ECO:0000256|HAMAP-Rule:MF_01470}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01470};; TaxID=330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleovorans/pseudoalcaligenes group.;" source="Pseudomonas pseudoalcaligenes.;"
CRISPR-associated endonuclease Cas1 n=1 Tax=Pseudomonas pseudoalcaligenes CECT 5344 RepID=I7IFW1_PSEPS
CRISPR-associated protein Cas1; K15342 CRISP-associated protein Cas1
SCNpilot_expt_1000_bf_scaffold_21086_2
unknown

Not on your lists

comp(634..1095)
DNA (462bp) protein (154aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_21086_3
Hydrocarboniphaga effusa, Hydrocarboniphaga, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1086..2156)
DNA (1071bp) protein (357aa)
Uncharacterized protein n=1 Tax=Hydrocarboniphaga effusa AP103 RepID=I7Z9A0_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIT68409.1}; TaxID=1172194 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Sinobacteraceae; Hydrocarboniphaga.;" source="Hydrocarboniphaga effusa AP103.;"
putative HD superfamily hydrolase
SCNpilot_expt_1000_bf_scaffold_21086_4
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2153..2671)
DNA (519bp) protein (173aa)
Phage integrase id=1270843 bin=GWE1_Burkholderiales_65_30 species=Acidovorax sp. NO-1 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
integrase
Tax=GWE1_Burkholderiales_65_30_curated
Displaying 4 items

View Taxonomy