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SCNpilot_expt_1000_bf_scaffold_2386

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_2386_1
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..103)
DNA (102bp) protein (34aa)
dehydrogenase complex, E1 component subunit alpha; K00161 pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] id=12494005 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
dehydrogenase complex, E1 component subunit alpha; K00161 pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
SCNpilot_expt_1000_bf_scaffold_2386_2
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

215..1015
DNA (801bp) protein (267aa)
leucyl aminopeptidase (EC:3.4.11.1); K01255 leucyl aminopeptidase [EC:3.4.11.1] id=12494004 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
leucyl aminopeptidase (EC:3.4.11.1); K01255 leucyl aminopeptidase [EC:3.4.11.1]
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_1000_bf_scaffold_2386_3
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

984..1700
DNA (717bp) protein (239aa)
leucyl aminopeptidase (EC:3.4.11.1); K01255 leucyl aminopeptidase [EC:3.4.11.1] id=12494003 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
leucyl aminopeptidase (EC:3.4.11.1); K01255 leucyl aminopeptidase [EC:3.4.11.1]
Tax=GWE1_Thiobacillus_62_9_curated
SCNpilot_expt_1000_bf_scaffold_2386_4

Not on your lists

comp(1708..2340)
DNA (633bp) protein (211aa)
hypothetical protein id=12494002 bin=THIO_HI species=Thiocystis violascens genus=Thiocystis taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
Uncharacterized protein {ECO:0000313|EMBL:KKK75824.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_2386_5
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2417..3154
DNA (738bp) protein (246aa)
ribosomal large subunit pseudouridine synthase A (EC:5.4.99.-); K06177 tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] id=12494001 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
ribosomal large subunit pseudouridine synthase A (EC:5.4.99.-); K06177 tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
Tax=GWE1_Thiobacillus_62_9_curated
SCNpilot_expt_1000_bf_scaffold_2386_6
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3183..3737)
DNA (555bp) protein (185aa)
GTP cyclohydrolase I id=12494000 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
GTP cyclohydrolase I
Tax=GWE1_Thiobacillus_62_9_curated
SCNpilot_expt_1000_bf_scaffold_2386_7
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3921..5585)
DNA (1665bp) protein (555aa)
acetolactate synthase, large subunit (EC:2.2.1.6); K01652 acetolactate synthase I/II/III large subunit [EC:2.2.1.6] id=12493999 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
acetolactate synthase, large subunit (EC:2.2.1.6); K01652 acetolactate synthase I/II/III large subunit [EC:2.2.1.6] rbh
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
SCNpilot_expt_1000_bf_scaffold_2386_8
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5834..6421)
DNA (588bp) protein (196aa)
hypothetical protein id=12493998 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_1000_bf_scaffold_2386_9
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6572..7651)
DNA (1080bp) protein (360aa)
transaldolase (EC:2.2.1.2); K00616 transaldolase [EC:2.2.1.2] id=12493997 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
transaldolase (EC:2.2.1.2); K00616 transaldolase [EC:2.2.1.2] rbh
Tax=GWE1_Thiobacillus_62_9_curated
SCNpilot_expt_1000_bf_scaffold_2386_10
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7792..8937
DNA (1146bp) protein (382aa)
chorismate synthase (EC:4.2.3.5); K01736 chorismate synthase [EC:4.2.3.5] id=12493996 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
chorismate synthase (EC:4.2.3.5); K01736 chorismate synthase [EC:4.2.3.5]
Tax=GWE1_Thiobacillus_62_9_curated
SCNpilot_expt_1000_bf_scaffold_2386_11
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9007..10374
DNA (1368bp) protein (456aa)
putative adenylate/guanylate cyclase; K01768 adenylate cyclase [EC:4.6.1.1] id=12493995 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
putative adenylate/guanylate cyclase; K01768 adenylate cyclase [EC:4.6.1.1]
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
Displaying 11 items

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