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SCNpilot_expt_1000_bf_scaffold_8082

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Displaying 5 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_8082_1
Lysobacter sp. A03, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2..1234)
DNA (1233bp) protein (411aa)
NODE_33, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ96648.1}; EC=3.5.4.1 {ECO:0000313|EMBL:KIQ96648.1};; TaxID=1199154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter sp. A03.;"
amidohydrolase 3 id=12494315 bin=THIO_HI species=unknown genus=Nitrosococcus taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
amidohydrolase 3 rbh
SCNpilot_expt_1000_bf_scaffold_8082_2
Lysobacter sp. A03, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1246..2451)
DNA (1206bp) protein (402aa)
major facilitator superfamily protein id=12494316 bin=THIO_HI species=unknown genus=Nitrosococcus taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
NODE_33, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ96647.1}; TaxID=1199154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter sp. A03.;"
major facilitator superfamily protein rbh
SCNpilot_expt_1000_bf_scaffold_8082_3
Sphingomonas parapaucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2506..2751)
DNA (246bp) protein (82aa)
NodT family RND efflux system outer membrane lipoprotein id=12494317 bin=THIO_HI species=Sphingobium xenophagum genus=Sphingobium taxon_order=Sphingomonadales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
Outer membrane protein OprM {ECO:0000313|EMBL:GAM01611.1}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas parapaucimobilis NBRC 15100.;"
NodT family RND efflux system outer membrane lipoprotein
SCNpilot_expt_1000_bf_scaffold_8082_4
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2821..3588)
DNA (768bp) protein (256aa)
exodeoxyribonuclease III (EC:3.1.11.2); K01142 exodeoxyribonuclease III [EC:3.1.11.2] id=12494318 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
exodeoxyribonuclease III (EC:3.1.11.2); K01142 exodeoxyribonuclease III [EC:3.1.11.2] rbh
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_1000_bf_scaffold_8082_5
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3709..4239)
DNA (531bp) protein (177aa)
hypothetical protein id=12494319 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
Displaying 5 items

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