ggKbase home page

SCNpilot_expt_1000_bf_scaffold_3554

Search features with annotation key words

Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_3554_1
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

51..575
DNA (525bp) protein (175aa)
type-4 fimbrial pilin related signal peptide protein; K08084 type IV fimbrial biogenesis protein FimT id=12497898 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
fimbrial pilin related signal peptide protein; K08084 type IV fimbrial biogenesis protein FimT
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
SCNpilot_expt_1000_bf_scaffold_3554_2

Not on your lists

772..1263
DNA (492bp) protein (164aa)
Putative type-4 fimbrial pilin related signal peptide protein n=1 Tax=mine drainage metagenome RepID=E6PLK3_9ZZZZ
Putative type-4 fimbrial pilin related signal peptide protein {ECO:0000313|EMBL:CBH95804.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
fimT; type-4 fimbrial pilin related protein; K08084 type IV fimbrial biogenesis protein FimT
SCNpilot_expt_1000_bf_scaffold_3554_3

Not on your lists

1260..1778
DNA (519bp) protein (173aa)
Putative type-4 fimbrial biogenesis PilV transmembrane protein n=1 Tax=mine drainage metagenome RepID=E6PLK4_9ZZZZ
Putative type-4 fimbrial biogenesis PilV transmembrane protein {ECO:0000313|EMBL:CBH95805.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
pilV; type-4 fimbrial biogenesis PilV transmembrane protein; K02671 type IV pilus assembly protein PilV
SCNpilot_expt_1000_bf_scaffold_3554_4
Cupriavidus metallidurans, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1775..2482
DNA (708bp) protein (236aa)
Putative type 4 fimbrial biogenesis transmembrane protein, pilW n=1 Tax=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) RepID=Q1LS00_RALME
putative type 4 fimbrial biogenesis transmembrane protein, pilW; K02672 type IV pilus assembly protein PilW
Putative type 4 fimbrial biogenesis transmembrane protein, pilW {ECO:0000313|EMBL:ABF07076.1}; TaxID=266264 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839).;"
SCNpilot_expt_1000_bf_scaffold_3554_5

Not on your lists

2479..3078
DNA (600bp) protein (200aa)
Putative type-4 fimbrial biogenesis transmembrane protein n=1 Tax=mine drainage metagenome RepID=E6PLK6_9ZZZZ
Putative type-4 fimbrial biogenesis transmembrane protein {ECO:0000313|EMBL:CBH95807.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
type-4 fimbrial biogenesis transmembrane protein; K02673 type IV pilus assembly protein PilX
SCNpilot_expt_1000_bf_scaffold_3554_6

Not on your lists

3107..7165
DNA (4059bp) protein (1353aa)
Putative type-4 fimbrial biogenesis pily1-related protein (Modular protein) n=1 Tax=mine drainage metagenome RepID=E6PLK7_9ZZZZ rbh
Putative type-4 fimbrial biogenesis pily1-related protein (Modular protein) {ECO:0000313|EMBL:CBH95808.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
pilY1; Type IV fimbrial biogenesis protein PilY1
SCNpilot_expt_1000_bf_scaffold_3554_7
Pseudomonas sp. M1, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7224..7706
DNA (483bp) protein (161aa)
Type 4 fimbrial biogenesis protein PilE n=1 Tax=Pseudomonas sp. (strain M1) RepID=L1HS84_PSEUO
Pilus assembly protein PilE {ECO:0000313|EMBL:ETM66797.1}; TaxID=95619 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. (strain M1).;"
type IV fimbrial biogenesis transmembrane pile-like protein; K02655 type IV pilus assembly protein PilE
SCNpilot_expt_1000_bf_scaffold_3554_8
unknown

Not on your lists

comp(7727..7819)
DNA (93bp) protein (31aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00037E9FD0
Displaying 8 items

View Taxonomy