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SCNpilot_expt_1000_bf_scaffold_5273

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_5273_1
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..797
DNA (795bp) protein (265aa)
DNA-(apurinic or apyrimidinic site) lyase (EC:4.2.99.18); K01142 exodeoxyribonuclease III [EC:3.1.11.2]
exodeoxyribonuclease III n=1 Tax=Thiobacillus thioparus RepID=UPI00036B3EF3
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_1000_bf_scaffold_5273_2
RBG_16_Betaproteobacteria_56_24_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

845..1714
DNA (870bp) protein (290aa)
DNA-damage-inducible protein D n=1 Tax=Acidithiobacillus sp. GGI-221 RepID=F8XLH8_9GAMM
dinD; DNA-damage-inducible protein D; K14623 DNA-damage-inducible protein D
Tax=RBG_16_Betaproteobacteria_56_24_curated
SCNpilot_expt_1000_bf_scaffold_5273_3
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1711..1950
DNA (240bp) protein (80aa)
N6 adenine-specific DNA methyltransferase protein, N12 class id=12497288 bin=THIO_MID species=Thauera terpenica genus=Thauera taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
SCNpilot_expt_1000_bf_scaffold_5273_4
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2053..2931
DNA (879bp) protein (293aa)
N6 adenine-specific DNA methyltransferase protein, N12 class id=12497288 bin=THIO_MID species=Thauera terpenica genus=Thauera taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
DNA methyltransferase {ECO:0000313|EMBL:GAO37586.1}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
N6 adenine-specific DNA methyltransferase protein, N12 class
SCNpilot_expt_1000_bf_scaffold_5273_5
Ralstonia pickettii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2792..3898)
DNA (1107bp) protein (369aa)
Uncharacterized protein n=1 Tax=Ralstonia pickettii DTP0602 RepID=U3QN24_RALPI rbh
Uncharacterized protein {ECO:0000313|EMBL:AGW91528.1}; TaxID=1366050 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia pickettii DTP0602.;"
hypothetical protein rbh
SCNpilot_expt_1000_bf_scaffold_5273_6
Thiorhodovibrio sp. 970, Thiorhodovibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3909..6506)
DNA (2598bp) protein (866aa)
hypothetical protein id=12494117 bin=THIO_HI species=Thiorhodovibrio sp. 970 genus=Thiorhodovibrio taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
Uncharacterized protein {ECO:0000313|EMBL:EIC19850.1}; TaxID=631362 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiorhodovibrio.;" source="Thiorhodovibrio sp. 970.;"
hypothetical protein rbh
SCNpilot_expt_1000_bf_scaffold_5273_7
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6573..7007)
DNA (435bp) protein (145aa)
hypothetical protein id=12494115 bin=THIO_HI species=Rhodospirillum centenum genus=Rhodospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_1000_bf_scaffold_5273_8
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7007..7240)
DNA (234bp) protein (78aa)
prevent-host-death family protein id=12494114 bin=THIO_HI species=unknown genus=Acidithiobacillus taxon_order=Acidithiobacillales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
prevent-host-death family protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_1000_bf_scaffold_5273_9
unknown

Not on your lists

comp(7311..7412)
DNA (102bp) protein (34aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_5273_10
RBG_16_Gallionellales_57_15_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7493..7717
DNA (225bp) protein (75aa)
hypothetical protein id=12494113 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein
Tax=RBG_16_Gallionellales_57_15_curated
SCNpilot_expt_1000_bf_scaffold_5273_11
unknown

Not on your lists

comp(7699..7854)
DNA (156bp) protein (52aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_5273_12
RBG_16_Gallionellales_57_15_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7924..8103
DNA (180bp) protein (60aa)
Death on curing protein, putative; K07341 death on curing protein id=12494112 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
death-on-curing family protein; K07341 death on curing protein
Tax=RBG_16_Gallionellales_57_15_curated
SCNpilot_expt_1000_bf_scaffold_5273_13
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8170..8727
DNA (558bp) protein (186aa)
putative transport transmembrane protein; K08218 MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG id=12494111 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
putative transport transmembrane protein; K08218 MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
Displaying 13 items

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