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SCNpilot_expt_1000_bf_scaffold_13772

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_13772_1
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3..620)
DNA (618bp) protein (206aa)
CmpX protein id=12495666 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
CmpX protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_1000_bf_scaffold_13772_2
Pseudomonas alkylphenolia, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1089..2315
DNA (1227bp) protein (409aa)
putative FMN-dependent dehydrogenase; K10530 lactate oxidase [EC:1.13.12.-] rbh
Lactate oxidase n=4 Tax=Escherichia coli RepID=S0YMQ7_ECOLX rbh
L-lactate oxidase {ECO:0000313|EMBL:AIL62333.1}; TaxID=237609 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas alkylphenolia.;"
SCNpilot_expt_1000_bf_scaffold_13772_3
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3011..4579
DNA (1569bp) protein (523aa)
transketolase (EC:2.2.1.1) rbh
Transketolase {ECO:0000256|RuleBase:RU004996}; EC=2.2.1.1 {ECO:0000256|RuleBase:RU004996};; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
transketolase n=1 Tax=Thiobacillus denitrificans RepID=UPI00037043E6 rbh
SCNpilot_expt_1000_bf_scaffold_13772_4
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4635..4847
DNA (213bp) protein (71aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00037F1702
Protein of unknown function (DUF2945)
Uncharacterized protein {ECO:0000313|EMBL:EIL97929.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
SCNpilot_expt_1000_bf_scaffold_13772_5
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4851..5405
DNA (555bp) protein (185aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00036A9AD2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG87291.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_expt_1000_bf_scaffold_13772_6
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5460..6203)
DNA (744bp) protein (248aa)
oxidoreductase FAD/NAD(P)-binding domain-containing protein; K00528 ferredoxin--NADP+ reductase [EC:1.18.1.2]
ferredoxin-NADP reductase n=1 Tax=Thioalkalivibrio sp. ALE23 RepID=UPI000379E01A
Tax=CG_Rhodocyc_01
SCNpilot_expt_1000_bf_scaffold_13772_7
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(6395..7312)
DNA (918bp) protein (306aa)
N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase (EC:2.1.1.72); K07320 putative adenine-specific DNA-methyltransferase [EC:2.1.1.72]
N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase n=1 Tax=Thiobacillus thioparus RepID=UPI00036A5A6D
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
Displaying 7 items

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