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SCNpilot_expt_1000_bf_scaffold_12828

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_12828_1
unknown

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1..66
DNA (66bp) protein (22aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_12828_2
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(97..1026)
DNA (930bp) protein (310aa)
id=12494586 bin=THIO_HI tax=THIO_HI organism_group=Betaproteobacteria rbh
putative NAD/FAD-dependent oxidoreductase; K06955
Tax=GWE1_Thiobacillus_62_9_curated
SCNpilot_expt_1000_bf_scaffold_12828_3
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1243..1671)
DNA (429bp) protein (143aa)
hypothetical protein id=12494587 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_1000_bf_scaffold_12828_4
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1675..3069)
DNA (1395bp) protein (465aa)
putative integral membrane protein; K06902 MFS transporter, UMF1 family id=12494588 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
putative integral membrane protein; K06902 MFS transporter, UMF1 family
Tax=GWE1_Thiobacillus_62_9_curated
SCNpilot_expt_1000_bf_scaffold_12828_5
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3069..4910)
DNA (1842bp) protein (614aa)
ABC-type transport system ATPase; K06147 ATP-binding cassette, subfamily B, bacterial id=12494589 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
ABC-type transport system ATPase {ECO:0000313|EMBL:AAZ97226.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
ABC-type transport system ATPase; K06147 ATP-binding cassette, subfamily B, bacterial rbh
SCNpilot_expt_1000_bf_scaffold_12828_6
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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4945..5292
DNA (348bp) protein (116aa)
hypothetical protein id=12494590 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_1000_bf_scaffold_12828_7
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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5299..6105
DNA (807bp) protein (269aa)
succinyl-diaminopimelate desuccinylase (EC:3.5.1.18); K01439 succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] id=12494591 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
succinyl-diaminopimelate desuccinylase (EC:3.5.1.18); K01439 succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_1000_bf_scaffold_12828_8
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6089..6466
DNA (378bp) protein (126aa)
succinyl-diaminopimelate desuccinylase (EC:3.5.1.18); K01439 succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] id=12494591 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
succinyl-diaminopimelate desuccinylase (EC:3.5.1.18); K01439 succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
Tax=GWE1_Thiobacillus_62_9_curated
SCNpilot_expt_1000_bf_scaffold_12828_9
unknown

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6528..6686
DNA (159bp) protein (53aa)

This feature has no annotations

Displaying 9 items

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