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SCNpilot_expt_1000_bf_scaffold_890

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_890_1
Legionella drancourtii, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

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1..240
DNA (240bp) protein (80aa)
surE; Acid phosphatase SurE (Stationary phase survival protein ); K03787 5'-nucleotidase [EC:3.1.3.5]
5'-nucleotidase SurE {ECO:0000256|HAMAP-Rule:MF_00060}; EC=3.1.3.5 {ECO:0000256|HAMAP-Rule:MF_00060};; Nucleoside 5'-monophosphate phosphohydrolase {ECO:0000256|HAMAP-Rule:MF_00060}; TaxID=658187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella drancourtii LLAP12.;"
5'-nucleotidase SurE n=1 Tax=Legionella drancourtii LLAP12 RepID=G9EU39_9GAMM
SCNpilot_expt_1000_bf_scaffold_890_2
Legionella longbeachae, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

248..991
DNA (744bp) protein (248aa)
Novel lipoprotein homolog NlpD n=2 Tax=Legionella longbeachae RepID=D3HRH9_LEGLN rbh
nlpD; novel lipoprotein homolog NlpD; K06194 lipoprotein NlpD rbh
Novel lipoprotein homolog NlpD {ECO:0000313|EMBL:CBJ11507.1}; TaxID=661367 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella longbeachae serogroup 1 (strain NSW150).;"
SCNpilot_expt_1000_bf_scaffold_890_3
Legionella drancourtii, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1138..2154
DNA (1017bp) protein (339aa)
RNA polymerase sigma factor RpoS n=1 Tax=Legionella drancourtii LLAP12 RepID=G9EU42_9GAMM rbh
RNA polymerase sigma factor RpoS {ECO:0000256|HAMAP-Rule:MF_00959}; Sigma S {ECO:0000256|HAMAP-Rule:MF_00959}; Sigma-38 {ECO:0000256|HAMAP-Rule:MF_00959}; TaxID=658187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella drancourtii LLAP12.;"
rpoS; RNA polymerase, sigma S (sigma 38) factor rbh
SCNpilot_expt_1000_bf_scaffold_890_4
Legionella drancourtii, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2246..3499)
DNA (1254bp) protein (418aa)
hmgA; Homogentisate 1,2-dioxygenase (EC:1.13.11.5); K00451 homogentisate 1,2-dioxygenase [EC:1.13.11.5] rbh
Putative uncharacterized protein n=1 Tax=Legionella drancourtii LLAP12 RepID=G9EU43_9GAMM rbh
Putative uncharacterized protein {ECO:0000313|EMBL:EHL29117.1}; TaxID=658187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella drancourtii LLAP12.;"
SCNpilot_expt_1000_bf_scaffold_890_5
Legionella fallonii, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3678..4418
DNA (741bp) protein (247aa)
transcriptional regulator n=1 Tax=Fluoribacter dumoffii RepID=UPI00026C7D55 rbh
Probable transcriptional regulatory protein yebC {ECO:0000256|HAMAP-Rule:MF_00693}; TaxID=1212491 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella fallonii LLAP-10.;"
hypothetical protein YebC rbh
SCNpilot_expt_1000_bf_scaffold_890_6
Legionella drancourtii, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4418..4939
DNA (522bp) protein (174aa)
Crossover junction endodeoxyribonuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106335}; EC=3.1.22.4 {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106388};; Holliday junction nuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; Holliday junction resolvase RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; TaxID=658187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella drancourtii LLAP12.;"
ruvC; Crossover junction endodeoxyribonuclease ruvC (EC:3.1.22.4); K01159 crossover junction endodeoxyribonuclease RuvC [EC:3.1.22.4]
Crossover junction endodeoxyribonuclease RuvC n=1 Tax=Legionella drancourtii LLAP12 RepID=G9EU45_9GAMM
SCNpilot_expt_1000_bf_scaffold_890_7
Legionella drancourtii, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4936..5535
DNA (600bp) protein (200aa)
Holliday junction ATP-dependent DNA helicase RuvA {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058935}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058896};; TaxID=658187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella drancourtii LLAP12.;"
ruvA; Holliday junction DNA helicase RuvA; K03550 holliday junction DNA helicase RuvA [EC:3.6.4.12]
Holliday junction ATP-dependent DNA helicase RuvA n=1 Tax=Legionella drancourtii LLAP12 RepID=G9EU46_9GAMM
SCNpilot_expt_1000_bf_scaffold_890_8
Legionella drancourtii, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5560..6846)
DNA (1287bp) protein (429aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=658187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella drancourtii LLAP12.;"
qseC; sensory histidine kinase in two-component regulatory system with QseB; K07645 two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3] rbh
Putative uncharacterized protein n=1 Tax=Legionella drancourtii LLAP12 RepID=G9EU47_9GAMM rbh
SCNpilot_expt_1000_bf_scaffold_890_9
Legionella drancourtii, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6972..7649)
DNA (678bp) protein (226aa)
transcriptional regulator n=1 Tax=Fluoribacter dumoffii RepID=UPI00026C7D59 rbh
Putative uncharacterized protein {ECO:0000313|EMBL:EHL29122.1}; TaxID=658187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella drancourtii LLAP12.;"
qseB; DNA-binding response regulator in two-component regulatory system with QseC; K02483 two-component system, OmpR family, response regulator rbh
SCNpilot_expt_1000_bf_scaffold_890_10
Legionella drancourtii, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7658..8203)
DNA (546bp) protein (182aa)
Probable intracellular septation protein A n=1 Tax=Legionella drancourtii LLAP12 RepID=G9EU49_9GAMM rbh
Probable intracellular septation protein A {ECO:0000256|HAMAP-Rule:MF_00189, ECO:0000256|SAAS:SAAS00082307}; TaxID=658187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella drancourtii LLAP12.;"
yciB; intracellular septation protein involved in cell division; K06190 intracellular septation protein rbh
SCNpilot_expt_1000_bf_scaffold_890_11
Legionella drancourtii, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8492..10123
DNA (1632bp) protein (544aa)
CTP synthase {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037303}; EC=6.3.4.2 {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037401};; CTP synthetase {ECO:0000256|HAMAP-Rule:MF_01227}; UTP--ammonia ligase {ECO:0000256|HAMAP-Rule:MF_01227}; TaxID=658187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella drancourtii LLAP12.;"
pyrG; CTP synthase (EC:6.3.4.2); K01937 CTP synthase [EC:6.3.4.2] rbh
CTP synthase n=1 Tax=Legionella drancourtii LLAP12 RepID=G9EM90_9GAMM rbh
SCNpilot_expt_1000_bf_scaffold_890_12
Legionella drancourtii, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10120..10950
DNA (831bp) protein (277aa)
kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase; K01627 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] rbh
2-dehydro-3-deoxyphosphooctonate aldolase {ECO:0000256|HAMAP-Rule:MF_00056, ECO:0000256|SAAS:SAAS00078566}; EC=2.5.1.55 {ECO:0000256|HAMAP-Rule:MF_00056, ECO:0000256|SAAS:SAAS00078538};; 3-deoxy-D-manno-octulosonic acid 8-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00056}; KDO-8-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00056}; Phospho-2-dehydro-3-deoxyoctonate aldolase {ECO:0000256|HAMAP-Rule:MF_00056}; TaxID=658187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae
2-dehydro-3-deoxyphosphooctonate aldolase n=1 Tax=Legionella drancourtii LLAP12 RepID=G9EM89_9GAMM rbh
SCNpilot_expt_1000_bf_scaffold_890_13
Legionella hackeliae, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11124..13748
DNA (2625bp) protein (875aa)
Putative uncharacterized protein n=1 Tax=Legionella drancourtii LLAP12 RepID=G9EJW1_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:CEK11537.1}; TaxID=449 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella hackeliae.;"
SCNpilot_expt_1000_bf_scaffold_890_14
Legionella longbeachae, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13815..14597)
DNA (783bp) protein (261aa)
fabI; enoyl-ACP reductase (EC:1.3.1.9); K00208 enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9] rbh
Enoyl-[acyl-carrier-protein] reductase [NADH] {ECO:0000256|PIRNR:PIRNR000094}; EC=1.3.1.9 {ECO:0000256|PIRNR:PIRNR000094, ECO:0000313|EMBL:CBJ11396.1};; TaxID=661367 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella longbeachae serogroup 1 (strain NSW150).;"
Enoyl-[acyl-carrier-protein] reductase [NADH] n=1 Tax=Legionella longbeachae serogroup 1 (strain NSW150) RepID=D3HR69_LEGLN rbh
SCNpilot_expt_1000_bf_scaffold_890_15
Legionella longbeachae, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14608..15243)
DNA (636bp) protein (212aa)
udk; uridine kinase (EC:2.7.1.48); K00876 uridine kinase [EC:2.7.1.48] rbh
Uridine kinase {ECO:0000256|HAMAP-Rule:MF_00551, ECO:0000256|RuleBase:RU003825}; EC=2.7.1.48 {ECO:0000256|HAMAP-Rule:MF_00551, ECO:0000256|RuleBase:RU003825};; Cytidine monophosphokinase {ECO:0000256|HAMAP-Rule:MF_00551}; Uridine monophosphokinase {ECO:0000256|HAMAP-Rule:MF_00551}; TaxID=661367 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella longbeachae serogroup 1 (strain NSW150).;"
uridine/cytidine kinase n=1 Tax=Fluoribacter dumoffii RepID=UPI00026C7AEC rbh
SCNpilot_expt_1000_bf_scaffold_890_16
Legionella drancourtii, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15295..17037)
DNA (1743bp) protein (581aa)
Alkaline phosphomonoesterase n=1 Tax=Legionella drancourtii LLAP12 RepID=G9EM86_9GAMM rbh
Alkaline phosphomonoesterase {ECO:0000313|EMBL:EHL31686.1}; TaxID=658187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella drancourtii LLAP12.;"
alkaline phosphatase rbh
SCNpilot_expt_1000_bf_scaffold_890_17
unknown

Not on your lists

17199..17885
DNA (687bp) protein (229aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_890_18
Legionella drancourtii, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17890..18219)
DNA (330bp) protein (110aa)
Rhodanese domain protein (EC:2.8.1.1)
Rhodanese domain-containing protein n=1 Tax=Legionella drancourtii LLAP12 RepID=G9EM83_9GAMM
Rhodanese domain-containing protein {ECO:0000313|EMBL:EHL31683.1}; TaxID=658187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella drancourtii LLAP12.;"
SCNpilot_expt_1000_bf_scaffold_890_19
Legionella fallonii, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18216..18488)
DNA (273bp) protein (91aa)
Putative uncharacterized protein n=1 Tax=Legionella drancourtii LLAP12 RepID=G9EM82_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:CEG57393.1}; TaxID=1212491 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella fallonii LLAP-10.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_890_20
Legionella drancourtii, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18607..19905
DNA (1299bp) protein (433aa)
gshA; glutamate--cysteine ligase; K01919 glutamate--cysteine ligase [EC:6.3.2.2] rbh
Glutamate-cysteine ligase n=1 Tax=Legionella drancourtii LLAP12 RepID=G9EM81_9GAMM rbh
Glutamate-cysteine ligase {ECO:0000313|EMBL:EHL31681.1}; TaxID=658187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella drancourtii LLAP12.;"
SCNpilot_expt_1000_bf_scaffold_890_21
Legionella drancourtii, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19905..20864
DNA (960bp) protein (320aa)
Glutathione synthetase {ECO:0000256|HAMAP-Rule:MF_00162}; EC=6.3.2.3 {ECO:0000256|HAMAP-Rule:MF_00162};; GSH synthetase {ECO:0000256|HAMAP-Rule:MF_00162}; Glutathione synthase {ECO:0000256|HAMAP-Rule:MF_00162}; TaxID=658187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella drancourtii LLAP12.;"
gshB; glutathione synthetase (EC:6.3.2.3); K01920 glutathione synthase [EC:6.3.2.3] rbh
Glutathione synthetase n=1 Tax=Legionella drancourtii LLAP12 RepID=G9EM80_9GAMM rbh
SCNpilot_expt_1000_bf_scaffold_890_22
Legionella pneumophila, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20885..21226)
DNA (342bp) protein (114aa)
hypothetical protein; K01724 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
Putative pterin-4-alpha-carbinolamine dehydratase {ECO:0000255|HAMAP-Rule:MF_00434}; Short=PHS {ECO:0000255|HAMAP-Rule:MF_00434};; EC=4.2.1.96 {ECO:0000255|HAMAP-Rule:MF_00434};; 4-alpha-hydroxy-tetrahydropterin dehydratase {ECO:0000255|HAMAP-Rule:MF_00434}; Pterin carbinolamine dehydratase {ECO:0000255|HAMAP-Rule:MF_00434}; Short=PCD {ECO:0000255|HAMAP-Rule:MF_00434};; TaxID=297245 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella pneumo
Putative pterin-4-alpha-carbinolamine dehydratase n=1 Tax=Legionella pneumophila (strain Lens) RepID=PHS_LEGPL
SCNpilot_expt_1000_bf_scaffold_890_23
Legionella drancourtii, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21244..22353)
DNA (1110bp) protein (370aa)
Histidinol-phosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_01023}; EC=2.6.1.9 {ECO:0000256|HAMAP-Rule:MF_01023};; Imidazole acetol-phosphate transaminase {ECO:0000256|HAMAP-Rule:MF_01023}; TaxID=658187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella drancourtii LLAP12.;"
hisC-2; histidinol-phosphate aminotransferase (EC:2.6.1.9); K00817 histidinol-phosphate aminotransferase [EC:2.6.1.9] rbh
Histidinol-phosphate aminotransferase n=1 Tax=Legionella drancourtii LLAP12 RepID=G9EQR1_9GAMM rbh
SCNpilot_expt_1000_bf_scaffold_890_24
unknown

Not on your lists

22498..22701
DNA (204bp) protein (68aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_890_25
Legionella fallonii, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22703..23434
DNA (732bp) protein (244aa)
Putative uncharacterized protein n=1 Tax=Legionella drancourtii LLAP12 RepID=G9EQR4_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:CEG57563.1}; TaxID=1212491 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella fallonii LLAP-10.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_890_26
Legionella drancourtii, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23431..23916
DNA (486bp) protein (162aa)
Putative uncharacterized protein n=1 Tax=Legionella drancourtii LLAP12 RepID=G9EQR5_9GAMM
Putative uncharacterized protein {ECO:0000313|EMBL:EHL30286.1}; TaxID=658187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella drancourtii LLAP12.;"
SCNpilot_expt_1000_bf_scaffold_890_27
Legionella drancourtii, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24191..24559)
DNA (369bp) protein (123aa)
Putative uncharacterized protein n=1 Tax=Legionella drancourtii LLAP12 RepID=G9EUH5_9GAMM
Putative uncharacterized protein {ECO:0000313|EMBL:EHL28975.1}; TaxID=658187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella drancourtii LLAP12.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_890_28
Legionella drancourtii, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24781..26040
DNA (1260bp) protein (420aa)
Membrane-bound lytic murein transglycosylase A {ECO:0000256|PIRNR:PIRNR019422}; EC=4.2.2.n1 {ECO:0000256|PIRNR:PIRNR019422};; Murein hydrolase A {ECO:0000256|PIRNR:PIRNR019422}; TaxID=658187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella drancourtii LLAP12.;"
mltA; membrane-bound lytic murein transglycosylase; K08304 membrane-bound lytic murein transglycosylase A [EC:3.2.1.-] rbh
Putative uncharacterized protein n=1 Tax=Legionella drancourtii LLAP12 RepID=G9EQS0_9GAMM rbh
Displaying 28 items

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