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SCNpilot_expt_1000_bf_scaffold_2150

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_2150_1
Legionella longbeachae, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

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623..1288
DNA (666bp) protein (222aa)
gatB; glutamyl-tRNA(Gln) amidotransferase subunit B (EC:6.3.5.-); K02434 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B {ECO:0000256|HAMAP-Rule:MF_00121, ECO:0000256|SAAS:SAAS00247567}; Short=Asp/Glu-ADT subunit B {ECO:0000256|HAMAP-Rule:MF_00121};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_00121, ECO:0000313|EMBL:CBJ12709.1};; TaxID=661367 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella longbeachae serogroup 1 (strain NSW150).;"
glutamyl-tRNA amidotransferase subunit B n=1 Tax=Fluoribacter dumoffii RepID=UPI00026C7FBE
SCNpilot_expt_1000_bf_scaffold_2150_2
Legionella longbeachae, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1755..2036)
DNA (282bp) protein (94aa)
DNA-binding protein Fis n=2 Tax=Legionella longbeachae RepID=D1RL12_LEGLO
Fis family transcriptional regulator; K03557 Fis family transcriptional regulator, factor for inversion stimulation protein
Putative DNA-binding protein fis {ECO:0000313|EMBL:CBJ12717.1}; TaxID=661367 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella longbeachae serogroup 1 (strain NSW150).;"
SCNpilot_expt_1000_bf_scaffold_2150_3
Legionella drancourtii, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

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2362..5016
DNA (2655bp) protein (885aa)
Putative uncharacterized protein n=1 Tax=Legionella drancourtii LLAP12 RepID=G9EUC6_9GAMM
Putative uncharacterized protein {ECO:0000313|EMBL:EHL29200.1}; TaxID=658187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella drancourtii LLAP12.;"
SCNpilot_expt_1000_bf_scaffold_2150_4
Legionella norrlandica, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5054..5422)
DNA (369bp) protein (123aa)
Putative uncharacterized protein n=1 Tax=Legionella drancourtii LLAP12 RepID=G9EUC5_9GAMM
Heme biosynthesis protein HemY {ECO:0000313|EMBL:KGP63885.1}; TaxID=1498499 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella norrlandica.;"
sufA; Fe-S cluster assembly protein; K13628 iron-sulfur cluster assembly protein
SCNpilot_expt_1000_bf_scaffold_2150_5
Legionella drancourtii, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5450..5827)
DNA (378bp) protein (126aa)
Putative uncharacterized protein n=1 Tax=Legionella drancourtii LLAP12 RepID=G9EUC4_9GAMM
Putative uncharacterized protein {ECO:0000313|EMBL:EHL29198.1}; TaxID=658187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella drancourtii LLAP12.;"
iron-sulfer cluster proteins NifU; K04488 nitrogen fixation protein NifU and related proteins
SCNpilot_expt_1000_bf_scaffold_2150_6
Legionella drancourtii, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5824..6996)
DNA (1173bp) protein (391aa)
IscS; cysteine desulfurase (EC:2.8.1.7); K04487 cysteine desulfurase [EC:2.8.1.7] rbh
Cysteine desulfurase NifS n=1 Tax=Legionella drancourtii LLAP12 RepID=G9EUC3_9GAMM rbh
Cysteine desulfurase NifS {ECO:0000313|EMBL:EHL29197.1}; TaxID=658187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella drancourtii LLAP12.;"
SCNpilot_expt_1000_bf_scaffold_2150_7
Legionella drancourtii, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6986..7774)
DNA (789bp) protein (263aa)
tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmJ {ECO:0000256|RuleBase:RU362024}; EC=2.1.1.200 {ECO:0000256|RuleBase:RU362024};; tRNA (cytidine(32)/uridine(32)-2'-O)-methyltransferase {ECO:0000256|RuleBase:RU362024}; tRNA Cm32/Um32 methyltransferase {ECO:0000256|RuleBase:RU362024}; TaxID=658187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella drancourtii LLAP12.;"
RNA methyltransferase (EC:2.1.1.-); K15396 tRNA (cytidine32/uridine32-2'-O)-methyltransferase [EC:2.1.1.200] rbh
Putative uncharacterized protein n=1 Tax=Legionella drancourtii LLAP12 RepID=G9EUC2_9GAMM rbh
SCNpilot_expt_1000_bf_scaffold_2150_8
Legionella drancourtii, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7877..8671
DNA (795bp) protein (265aa)
suhB; inositol monophosphatase (EC:3.1.3.25); K01092 myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] rbh
Inositol-1-monophosphatase n=1 Tax=Legionella drancourtii LLAP12 RepID=G9EUC1_9GAMM rbh
Inositol-1-monophosphatase {ECO:0000313|EMBL:EHL29195.1}; TaxID=658187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella drancourtii LLAP12.;"
SCNpilot_expt_1000_bf_scaffold_2150_9
R_Gammaproteobacteria_37_34, Gammaproteobacteria, Proteobacteria, Bacteria

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8832..10316
DNA (1485bp) protein (495aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2BAC2_9BACT
Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_37_34_curated
SCNpilot_expt_1000_bf_scaffold_2150_10
Legionella pneumophila, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10524..12776
DNA (2253bp) protein (751aa)
Uncharacterized protein n=1 Tax=Legionella pneumophila (strain Corby) RepID=A5IDC7_LEGPC rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:GAN27244.1}; TaxID=446 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella pneumophila.;"
SCNpilot_expt_1000_bf_scaffold_2150_11
unknown

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13290..14528
DNA (1239bp) protein (413aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_2150_12
Legionella drancourtii, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15026..15976)
DNA (951bp) protein (317aa)
sppA; signal peptide peptidase; K04773 protease IV [EC:3.4.21.-] rbh
Signal peptide peptidase n=1 Tax=Legionella drancourtii LLAP12 RepID=G9EUB9_9GAMM rbh
Signal peptide peptidase {ECO:0000313|EMBL:EHL29193.1}; TaxID=658187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella drancourtii LLAP12.;"
SCNpilot_expt_1000_bf_scaffold_2150_13
Legionella longbeachae, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16554..18650
DNA (2097bp) protein (699aa)
Endopeptidase Clp ATP-binding chain B (ClpB) n=2 Tax=Legionella longbeachae RepID=D3HJW9_LEGLN
Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034}; TaxID=661367 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella longbeachae serogroup 1 (strain NSW150).;"
clpB; endopeptidase Clp ATP-binding subunit B; K03695 ATP-dependent Clp protease ATP-binding subunit ClpB
SCNpilot_expt_1000_bf_scaffold_2150_14
unknown

Not on your lists

18665..18850
DNA (186bp) protein (62aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_2150_15
unknown

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18851..19807
DNA (957bp) protein (319aa)

This feature has no annotations

Displaying 15 items

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