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SCNpilot_expt_1000_bf_scaffold_1131

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Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_1131_1
Legionella massiliensis, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..624
DNA (624bp) protein (208aa)
Uncharacterized protein n=1 Tax=Legionella pneumophila (strain Corby) RepID=A5IEG5_LEGPC
Site-specific tyrosine recombinase XerC {ECO:0000313|EMBL:CDZ76720.1}; Tyrosine recombinase XerC {ECO:0000313|EMBL:CEE12458.1}; TaxID=1034943 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella massiliensis.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1131_2
Legionella drancourtii, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(909..2771)
DNA (1863bp) protein (621aa)
RNA polymerase sigma factor RpoD n=1 Tax=Legionella drancourtii LLAP12 RepID=G9EMZ1_9GAMM rbh
RNA polymerase sigma factor RpoD {ECO:0000256|HAMAP-Rule:MF_00963}; Sigma-70 {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=658187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella drancourtii LLAP12.;"
rpoD; RNA polymerase sigma factor rpoD (Sigma-70); K03086 RNA polymerase primary sigma factor rbh
SCNpilot_expt_1000_bf_scaffold_1131_3
Legionella longbeachae, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2923..4653)
DNA (1731bp) protein (577aa)
dnaG; DNA primase (EC:2.7.7.-); K02316 DNA primase [EC:2.7.7.-] rbh
DNA primase {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811};; TaxID=661367 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella longbeachae serogroup 1 (strain NSW150).;"
DNA primase n=1 Tax=Fluoribacter dumoffii RepID=UPI00026C7850 rbh
SCNpilot_expt_1000_bf_scaffold_1131_4
Legionella norrlandica, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4661..5104)
DNA (444bp) protein (148aa)
aspartyl-tRNA amidotransferase subunit B n=1 Tax=Fluoribacter dumoffii RepID=UPI00026C7851
Glutamyl-tRNA amidotransferase {ECO:0000313|EMBL:KGP63130.1}; TaxID=1498499 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella norrlandica.;"
lporfX; hypothetical protein; K09117 hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1131_5
Legionella norrlandica, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5202..5429)
DNA (228bp) protein (76aa)
30S ribosomal protein S21 n=1 Tax=Legionella drancourtii LLAP12 RepID=G9EMZ4_9GAMM
30S ribosomal protein S21 {ECO:0000256|HAMAP-Rule:MF_00358, ECO:0000256|RuleBase:RU000667}; TaxID=1498499 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella norrlandica.;"
rpsU; 30S ribosomal protein S21
SCNpilot_expt_1000_bf_scaffold_1131_6
Legionella drancourtii, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


5683..6684
DNA (1002bp) protein (334aa)
tRNA N6-adenosine threonylcarbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00195365}; EC=2.3.1.234 {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00182339};; N6-L-threonylcarbamoyladenine synthase {ECO:0000256|HAMAP-Rule:MF_01445}; t(6)A37 threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000256|HAMAP-Rule:MF_01445}; tRNA threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000256|HAMAP-Rule:MF_01445}; TaxID=658187 species="Bacteria; Proteobacteria; Gammapro
gcp; O-sialoglycoprotein endopeptidase (EC:3.4.24.57); K01409 O-sialoglycoprotein endopeptidase [EC:3.4.24.57] rbh
UGMP family protein n=1 Tax=Fluoribacter dumoffii RepID=UPI00026C790A rbh
SCNpilot_expt_1000_bf_scaffold_1131_7
Legionella longbeachae, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6706..7644)
DNA (939bp) protein (313aa)
hypothetical protein; K08591 glycerol-3-phosphate acyltransferase PlsY [EC:2.3.1.15]
hypothetical protein n=1 Tax=Legionella shakespearei RepID=UPI00037D55DB
Glycerol-3-phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Acyl-PO4 G3P acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Acyl-phosphate--glycerol-3-phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; G3P acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Lysophosphatidic acid synthase {ECO:0000256|HAMAP-Rule:MF_01043}; TaxID=661367 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella longbeachae serogroup 1 (strain NS
SCNpilot_expt_1000_bf_scaffold_1131_8
Legionella fallonii, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7794..8924)
DNA (1131bp) protein (377aa)
Oxygen-independent coproporphyrinogen-III oxidase-like protein HI_0463 {ECO:0000313|EMBL:CEG58590.1}; EC=1.3.99.- {ECO:0000313|EMBL:CEG58590.1};; TaxID=1212491 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella fallonii LLAP-10.;"
hemN; oxygen-independent coproporphyrinogen III oxidase (EC:1.3.99.22); K02495 oxygen-independent coproporphyrinogen III oxidase [EC:1.3.99.22] rbh
HemN family oxidoreductase n=1 Tax=Legionella shakespearei RepID=UPI000365FD12 rbh
SCNpilot_expt_1000_bf_scaffold_1131_9
Legionella drancourtii, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9021..10010
DNA (990bp) protein (330aa)
Malate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01517, ECO:0000256|RuleBase:RU000422}; EC=1.1.1.37 {ECO:0000256|HAMAP-Rule:MF_01517, ECO:0000256|RuleBase:RU000422};; TaxID=658187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella drancourtii LLAP12.;"
mdh; malate dehydrogenase (EC:1.1.1.37); K00024 malate dehydrogenase [EC:1.1.1.37] rbh
Malate dehydrogenase n=1 Tax=Legionella drancourtii LLAP12 RepID=G9EMZ8_9GAMM rbh
SCNpilot_expt_1000_bf_scaffold_1131_10
Legionella drancourtii, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10007..10873)
DNA (867bp) protein (289aa)
Putative uncharacterized protein n=1 Tax=Legionella drancourtii LLAP12 RepID=G9EMZ9_9GAMM
Putative uncharacterized protein {ECO:0000313|EMBL:EHL31160.1}; TaxID=658187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella drancourtii LLAP12.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1131_11
Legionella drancourtii, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11023..11961
DNA (939bp) protein (313aa)
Putative drug/metabolite transporter superfamily protein n=1 Tax=Legionella drancourtii LLAP12 RepID=G9EN00_9GAMM rbh
Putative drug/metabolite transporter superfamily protein {ECO:0000313|EMBL:EHL31161.1}; TaxID=658187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella drancourtii LLAP12.;"
hypothetical protein rbh
SCNpilot_expt_1000_bf_scaffold_1131_12
Legionella drancourtii, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11992..14016
DNA (2025bp) protein (675aa)
fadH; 2,4-dienoyl-CoA reductase (EC:1.3.1.34); K00219 2,4-dienoyl-CoA reductase (NADPH2) [EC:1.3.1.34] rbh
2,4-dienoyl-CoA reductase FadH1 n=1 Tax=Legionella drancourtii LLAP12 RepID=G9EN01_9GAMM rbh
2,4-dienoyl-CoA reductase FadH1 {ECO:0000313|EMBL:EHL31162.1}; TaxID=658187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella drancourtii LLAP12.;"
SCNpilot_expt_1000_bf_scaffold_1131_13
Legionella drancourtii, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14263..15969
DNA (1707bp) protein (569aa)
ATP-dependent RNA helicase DeaD {ECO:0000256|HAMAP-Rule:MF_00964}; EC=3.6.4.13 {ECO:0000256|HAMAP-Rule:MF_00964};; Cold-shock DEAD box protein A {ECO:0000256|HAMAP-Rule:MF_00964}; TaxID=658187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella drancourtii LLAP12.;"
deaD; ATP-dependent RNA helicase deaD (cold-shock DEAD-box protein A); K05592 ATP-dependent RNA helicase DeaD [EC:3.6.4.13] rbh
ATP-dependent RNA helicase DeaD n=1 Tax=Legionella drancourtii LLAP12 RepID=G9EN04_9GAMM rbh
SCNpilot_expt_1000_bf_scaffold_1131_14
Legionella norrlandica, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16238..17164
DNA (927bp) protein (309aa)
Putative uncharacterized protein n=1 Tax=Legionella drancourtii LLAP12 RepID=G9EN06_9GAMM
Lysophospholipase {ECO:0000313|EMBL:KGP63117.1}; TaxID=1498499 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella norrlandica.;"
plaA; lysophospholipase A
SCNpilot_expt_1000_bf_scaffold_1131_15
Legionella drancourtii, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17174..18070
DNA (897bp) protein (299aa)
Putative uncharacterized protein n=1 Tax=Legionella drancourtii LLAP12 RepID=G9EN07_9GAMM
Putative uncharacterized protein {ECO:0000313|EMBL:EHL31168.1}; TaxID=658187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella drancourtii LLAP12.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1131_16
unknown

Not on your lists

comp(18091..18408)
DNA (318bp) protein (106aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_1131_17
Legionella longbeachae, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18571..19461)
DNA (891bp) protein (297aa)
Dna-J like chaperone protein n=2 Tax=Legionella longbeachae RepID=D3HPS4_LEGLN rbh
djlA; molecular chaperone DnaJ; K05801 DnaJ like chaperone protein rbh
Dna-J like chaperone protein {ECO:0000313|EMBL:CBJ10888.1}; TaxID=661367 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella longbeachae serogroup 1 (strain NSW150).;"
SCNpilot_expt_1000_bf_scaffold_1131_18
Legionella drancourtii, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21426..22241)
DNA (816bp) protein (272aa)
Release factor glutamine methyltransferase {ECO:0000256|HAMAP-Rule:MF_02126}; Short=RF MTase {ECO:0000256|HAMAP-Rule:MF_02126};; EC=2.1.1.297 {ECO:0000256|HAMAP-Rule:MF_02126};; N5-glutamine methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-(glutamine-N5) MTase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-glutamine N-methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; TaxID=658187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" so
hemK; methyltransferase HemK; K02493 release factor glutamine methyltransferase [EC:2.1.1.-] rbh
Release factor glutamine methyltransferase n=1 Tax=Legionella drancourtii LLAP12 RepID=G9EN12_9GAMM rbh
SCNpilot_expt_1000_bf_scaffold_1131_19
Legionella fallonii, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22238..23320)
DNA (1083bp) protein (361aa)
Peptide chain release factor 1 n=2 Tax=Legionella longbeachae RepID=D3HPS8_LEGLN rbh
Peptide chain release factor 1 {ECO:0000256|HAMAP-Rule:MF_00093}; Short=RF-1 {ECO:0000256|HAMAP-Rule:MF_00093};; TaxID=1212491 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella fallonii LLAP-10.;"
prfA; peptide chain release factor 1; K02835 peptide chain release factor 1 rbh
SCNpilot_expt_1000_bf_scaffold_1131_20
Legionella drancourtii, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23304..24653)
DNA (1350bp) protein (450aa)
Glutamyl-tRNA reductase {ECO:0000256|HAMAP-Rule:MF_00087, ECO:0000256|RuleBase:RU000584}; Short=GluTR {ECO:0000256|HAMAP-Rule:MF_00087};; EC=1.2.1.70 {ECO:0000256|HAMAP-Rule:MF_00087, ECO:0000256|RuleBase:RU000584};; TaxID=658187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella drancourtii LLAP12.;"
hemA; glutamyl tRNA reductase; K02492 glutamyl-tRNA reductase [EC:1.2.1.70] rbh
Glutamyl-tRNA reductase n=1 Tax=Legionella drancourtii LLAP12 RepID=G9EN14_9GAMM rbh
SCNpilot_expt_1000_bf_scaffold_1131_21
Legionella drancourtii, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24774..25055
DNA (282bp) protein (94aa)
Putative uncharacterized protein n=1 Tax=Legionella drancourtii LLAP12 RepID=G9EN15_9GAMM
Putative uncharacterized protein {ECO:0000313|EMBL:EHL31176.1}; TaxID=658187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella drancourtii LLAP12.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1131_22
Legionella drancourtii, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25094..26170
DNA (1077bp) protein (359aa)
metalloprotease; K11749 regulator of sigma E protease [EC:3.4.24.-] rbh
Putative uncharacterized protein n=1 Tax=Legionella drancourtii LLAP12 RepID=G9EN16_9GAMM rbh
Putative uncharacterized protein {ECO:0000313|EMBL:EHL31177.1}; TaxID=658187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella drancourtii LLAP12.;"
SCNpilot_expt_1000_bf_scaffold_1131_23
Legionella drancourtii, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26172..26867)
DNA (696bp) protein (232aa)
Competence protein ComF n=1 Tax=Legionella drancourtii LLAP12 RepID=G9EN17_9GAMM
comF; competence protein ComF
Competence protein ComF {ECO:0000313|EMBL:EHL31178.1}; TaxID=658187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella drancourtii LLAP12.;"
SCNpilot_expt_1000_bf_scaffold_1131_24
unknown

Not on your lists

26898..26990
DNA (93bp) protein (31aa)

This feature has no annotations

Displaying 24 items

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