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SCNpilot_expt_1000_bf_scaffold_1354

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_1354_1
Legionella drancourtii, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(2..616)
DNA (615bp) protein (205aa)
DNA gyrase subunit A {ECO:0000256|HAMAP-Rule:MF_01897}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01897};; TaxID=658187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella drancourtii LLAP12.;"
gyrA; DNA gyrase, subunit A, type II topoisomerase; K02469 DNA gyrase subunit A [EC:5.99.1.3]
DNA gyrase subunit A n=1 Tax=Legionella drancourtii LLAP12 RepID=G9ENM0_9GAMM
SCNpilot_expt_1000_bf_scaffold_1354_2
unknown

Not on your lists

679..831
DNA (153bp) protein (51aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_1354_3
Legionella fallonii, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

919..2190
DNA (1272bp) protein (424aa)
Citrate synthase {ECO:0000256|PIRNR:PIRNR001369, ECO:0000256|RuleBase:RU003370}; EC=2.3.3.16 {ECO:0000256|RuleBase:RU003370};; TaxID=1212491 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella fallonii LLAP-10.;"
gltA; citrate synthase (EC:2.3.3.1); K01647 citrate synthase [EC:2.3.3.1] rbh
Citrate synthase n=1 Tax=Legionella drancourtii LLAP12 RepID=G9ENM1_9GAMM rbh
SCNpilot_expt_1000_bf_scaffold_1354_4
Legionella drancourtii, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2226..3695)
DNA (1470bp) protein (490aa)
Glycerol kinase {ECO:0000256|SAAS:SAAS00029376}; EC=2.7.1.30 {ECO:0000256|SAAS:SAAS00029376};; TaxID=658187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella drancourtii LLAP12.;"
glpK; glycerol kinase (EC:2.7.1.30) rbh
Putative uncharacterized protein n=1 Tax=Legionella drancourtii LLAP12 RepID=G9ENM2_9GAMM rbh
SCNpilot_expt_1000_bf_scaffold_1354_5
Legionella drancourtii, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3806..5326
DNA (1521bp) protein (507aa)
Glycerol-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361217}; EC=1.1.5.3 {ECO:0000256|RuleBase:RU361217};; TaxID=658187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella drancourtii LLAP12.;"
glpD; glycerol-3-phosphate dehydrogenase (EC:1.1.5.3); K00111 glycerol-3-phosphate dehydrogenase [EC:1.1.5.3] rbh
Putative uncharacterized protein n=1 Tax=Legionella drancourtii LLAP12 RepID=G9ENM3_9GAMM rbh
SCNpilot_expt_1000_bf_scaffold_1354_6
Legionella drancourtii, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5283..5648)
DNA (366bp) protein (122aa)
Thioredoxin n=1 Tax=Legionella drancourtii LLAP12 RepID=G9ENM4_9GAMM
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=658187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella drancourtii LLAP12.;"
trxA; thioredoxin
SCNpilot_expt_1000_bf_scaffold_1354_7
Legionella longbeachae, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5630..6313)
DNA (684bp) protein (228aa)
adk; adenylate kinase (EC:2.7.4.3); K00939 adenylate kinase [EC:2.7.4.3] rbh
Adenylate kinase {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331}; Short=AK {ECO:0000256|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331};; ATP-AMP transphosphorylase {ECO:0000256|HAMAP-Rule:MF_00235}; ATP:AMP phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00235}; Adenylate monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00235}; TaxID=661367 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" so
Adenylate kinase n=2 Tax=Legionella longbeachae RepID=D3HSH6_LEGLN rbh
SCNpilot_expt_1000_bf_scaffold_1354_8
Legionella drancourtii, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6417..7037)
DNA (621bp) protein (207aa)
Putative uncharacterized protein n=1 Tax=Legionella drancourtii LLAP12 RepID=G9ENM7_9GAMM rbh
Putative uncharacterized protein {ECO:0000313|EMBL:EHL31140.1}; TaxID=658187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella drancourtii LLAP12.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1354_9
unknown

Not on your lists

comp(7107..7199)
DNA (93bp) protein (31aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_1354_10
Legionella drancourtii, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7646..8875)
DNA (1230bp) protein (410aa)
ribA; riboflavin biosynthesis protein RibA; K14652 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] rbh
Riboflavin biosynthesis protein RibBA n=1 Tax=Legionella drancourtii LLAP12 RepID=G9EM91_9GAMM rbh
Riboflavin biosynthesis protein RibBA {ECO:0000256|HAMAP-Rule:MF_01283, ECO:0000256|SAAS:SAAS00280052}; TaxID=658187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella drancourtii LLAP12.;"
SCNpilot_expt_1000_bf_scaffold_1354_11
Legionella longbeachae, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8872..9951)
DNA (1080bp) protein (360aa)
ribD; riboflavin biosynthesis protein RibD (EC:3.5.4.26); K11752 diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] rbh
Riboflavin biosynthesis protein RibD n=2 Tax=Legionella longbeachae RepID=D3HR62_LEGLN rbh
Riboflavin biosynthesis protein RibD {ECO:0000256|PIRNR:PIRNR006769, ECO:0000313|EMBL:CBJ11389.1}; TaxID=661367 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella longbeachae serogroup 1 (strain NSW150).;"
SCNpilot_expt_1000_bf_scaffold_1354_12
Legionella drancourtii, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10014..11396
DNA (1383bp) protein (461aa)
Putative beta-barrel assembly-enhancing protease {ECO:0000256|HAMAP-Rule:MF_00997}; EC=3.4.-.- {ECO:0000256|HAMAP-Rule:MF_00997};; Flags: Precursor;; TaxID=658187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella drancourtii LLAP12.;"
Zn-dependent protease n=1 Tax=Legionella drancourtii LLAP12 RepID=G9EM93_9GAMM rbh
protease rbh
SCNpilot_expt_1000_bf_scaffold_1354_13
Blastomonas sp. CACIA14H2, Blastomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11501..12736
DNA (1236bp) protein (412aa)
UPI0003CFCB94 related cluster n=1 Tax=unknown RepID=UPI0003CFCB94
Uncharacterized protein {ECO:0000313|EMBL:ESZ85629.1}; TaxID=1419876 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Blastomonas.;" source="Blastomonas sp. CACIA14H2.;"
hypothetical protein; K09190 hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1354_14
Legionella drancourtii, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12880..13365)
DNA (486bp) protein (162aa)
UPF0234 protein LDG_6358 n=1 Tax=Legionella drancourtii LLAP12 RepID=G9EM94_9GAMM
UPF0234 protein LDG_6358 {ECO:0000256|HAMAP-Rule:MF_00632}; TaxID=658187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella drancourtii LLAP12.;"
hypothetical protein; K09767 hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1354_15
Legionella longbeachae, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13426..13836)
DNA (411bp) protein (137aa)
Hypothetical membrane protein n=2 Tax=Legionella longbeachae RepID=D3HR57_LEGLN
hypothetical protein
Hypothetical membrane protein {ECO:0000313|EMBL:CBJ11384.1}; TaxID=661367 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella longbeachae serogroup 1 (strain NSW150).;"
SCNpilot_expt_1000_bf_scaffold_1354_16
Legionella drancourtii, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13974..14168
DNA (195bp) protein (65aa)
Putative uncharacterized protein n=1 Tax=Legionella drancourtii LLAP12 RepID=G9EM96_9GAMM
Putative uncharacterized protein {ECO:0000313|EMBL:EHL31696.1}; TaxID=658187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella drancourtii LLAP12.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1354_17
Legionella fallonii, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14197..16233)
DNA (2037bp) protein (679aa)
DNA-directed DNA polymerase {ECO:0000256|SAAS:SAAS00057170}; EC=2.7.7.7 {ECO:0000256|SAAS:SAAS00057170};; TaxID=1212491 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella fallonii LLAP-10.;"
dnaE; DNA polymerase III, alpha chain (EC:2.7.7.7); K02337 DNA polymerase III subunit alpha [EC:2.7.7.7]
DNA polymerase III subunit alpha n=1 Tax=Fluoribacter dumoffii RepID=UPI00026C80A7
SCNpilot_expt_1000_bf_scaffold_1354_18
Legionella drancourtii, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16265..17635)
DNA (1371bp) protein (457aa)
DNA-directed DNA polymerase {ECO:0000256|SAAS:SAAS00057170}; EC=2.7.7.7 {ECO:0000256|SAAS:SAAS00057170};; TaxID=658187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella drancourtii LLAP12.;"
dnaE; DNA polymerase III, alpha chain (EC:2.7.7.7); K02337 DNA polymerase III subunit alpha [EC:2.7.7.7]
DNA polymerase III subunit alpha n=1 Tax=Legionella drancourtii LLAP12 RepID=G9EQQ6_9GAMM rbh
SCNpilot_expt_1000_bf_scaffold_1354_19
Legionella longbeachae, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17710..19050)
DNA (1341bp) protein (447aa)
peptide ABC transporter permease n=1 Tax=Fluoribacter dumoffii RepID=UPI00026C80A8 rbh
ABC transporter permease; K02034 peptide/nickel transport system permease protein rbh
Putative ABC transporter, permease protein {ECO:0000313|EMBL:CBJ12312.1}; TaxID=661367 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella longbeachae serogroup 1 (strain NSW150).;"
SCNpilot_expt_1000_bf_scaffold_1354_20
Legionella drancourtii, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19051..20028)
DNA (978bp) protein (326aa)
Peptide ABC transporter, permease protein n=1 Tax=Legionella drancourtii LLAP12 RepID=G9EML9_9GAMM rbh
Peptide ABC transporter, permease protein {ECO:0000313|EMBL:EHL31413.1}; TaxID=658187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella drancourtii LLAP12.;"
peptide ABC transporter permease; K02033 peptide/nickel transport system permease protein rbh
SCNpilot_expt_1000_bf_scaffold_1354_21
Legionella drancourtii, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20025..21707)
DNA (1683bp) protein (561aa)
peptide ABC transporter substrate-binding protein n=1 Tax=Fluoribacter dumoffii RepID=UPI00026C80AA rbh
Extracellular solute-binding protein {ECO:0000313|EMBL:EHL31414.1}; TaxID=658187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella drancourtii LLAP12.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1354_22
Legionella pneumophila, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21749..22129)
DNA (381bp) protein (127aa)
Bacterial extracellular solute-binding protein n=2 Tax=Legionella pneumophila RepID=A5IFV0_LEGPC
extracellular solute-binding protein
Bacterial extracellular solute-binding protein {ECO:0000313|EMBL:ADG24292.1}; TaxID=423212 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella pneumophila serogroup 1 (strain 2300/99 Alcoy).;"
SCNpilot_expt_1000_bf_scaffold_1354_23
Legionella norrlandica, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22140..22907)
DNA (768bp) protein (256aa)
DNA ligase {ECO:0000256|HAMAP-Rule:MF_01588, ECO:0000256|RuleBase:RU000618}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01588, ECO:0000256|RuleBase:RU000618};; Polydeoxyribonucleotide synthase [NAD(+)] {ECO:0000256|HAMAP-Rule:MF_01588}; TaxID=1498499 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella norrlandica.;"
lig; DNA ligase (EC:6.5.1.2); K01972 DNA ligase (NAD+) [EC:6.5.1.2]
NAD-dependent DNA ligase LigA n=1 Tax=Legionella shakespearei RepID=UPI00037C07AF
Displaying 23 items

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