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SCNpilot_expt_1000_bf_scaffold_1665

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_1665_1
Legionella drancourtii, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

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2..862
DNA (861bp) protein (287aa)
Putative uncharacterized protein n=1 Tax=Legionella drancourtii LLAP12 RepID=G9ERD4_9GAMM
Putative uncharacterized protein {ECO:0000313|EMBL:EHL30103.1}; TaxID=658187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella drancourtii LLAP12.;"
SCNpilot_expt_1000_bf_scaffold_1665_2
Legionella norrlandica, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

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968..1831
DNA (864bp) protein (288aa)
Site-determining protein n=1 Tax=Legionella longbeachae D-4968 RepID=D1RL71_LEGLO rbh
Site-determining protein {ECO:0000256|PIRNR:PIRNR003092}; TaxID=1498499 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella norrlandica.;"
minD; Septum site-determining protein (cell division inhibitor); K03609 septum site-determining protein MinD rbh
SCNpilot_expt_1000_bf_scaffold_1665_3
Legionella drancourtii, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1828..2091
DNA (264bp) protein (88aa)
Cell division topological specificity factor n=1 Tax=Legionella drancourtii LLAP12 RepID=G9ERD2_9GAMM
Cell division topological specificity factor {ECO:0000256|HAMAP-Rule:MF_00262, ECO:0000256|SAAS:SAAS00085645}; TaxID=658187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella drancourtii LLAP12.;"
minE; Septum formation topological specificity factor; K03608 cell division topological specificity factor
SCNpilot_expt_1000_bf_scaffold_1665_4
unknown

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comp(2152..3435)
DNA (1284bp) protein (428aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_1665_5
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(3507..4586)
DNA (1080bp) protein (360aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=N2BCQ4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KKB56128.1}; TaxID=927665 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii DSM 19448 = WAL 12034.;"
acyltransferase 3
SCNpilot_expt_1000_bf_scaffold_1665_6
unknown

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comp(4640..5362)
DNA (723bp) protein (241aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_1665_7
Legionella hackeliae, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5304..8300)
DNA (2997bp) protein (999aa)
Endo-1,3(4)-beta-glucanase {ECO:0000313|EMBL:CEK11357.1}; EC=3.2.1.6 {ECO:0000313|EMBL:CEK11357.1};; TaxID=449 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella hackeliae.;"
hypothetical protein n=1 Tax=Fluoribacter dumoffii RepID=UPI00026C7DC5 rbh
glycoside hydrolase family 81
SCNpilot_expt_1000_bf_scaffold_1665_8
Legionella drancourtii, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8462..9313)
DNA (852bp) protein (284aa)
4-hydroxybenzoate octaprenyltransferase {ECO:0000256|SAAS:SAAS00188627}; EC=2.5.1.- {ECO:0000256|SAAS:SAAS00188633};; TaxID=658187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella drancourtii LLAP12.;"
ubiA; 4-hydroxybenzoate-octaprenyltransferase (EC:2.5.1.-); K03179 4-hydroxybenzoate octaprenyltransferase [EC:2.5.1.-] rbh
Putative uncharacterized protein n=1 Tax=Legionella drancourtii LLAP12 RepID=G9ENK4_9GAMM rbh
SCNpilot_expt_1000_bf_scaffold_1665_9
Legionella drancourtii, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9313..9849)
DNA (537bp) protein (179aa)
Chorismate lyase {ECO:0000256|SAAS:SAAS00005393}; EC=4.1.3.40 {ECO:0000256|SAAS:SAAS00005393};; TaxID=658187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella drancourtii LLAP12.;"
Putative uncharacterized protein n=1 Tax=Legionella drancourtii LLAP12 RepID=G9ENK5_9GAMM
ubiC; 4-hydroxybenzoate synthetase
SCNpilot_expt_1000_bf_scaffold_1665_10
Legionella pneumophila, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10032..10511)
DNA (480bp) protein (160aa)
Tfp type 4 fimbrial pilin like signal peptide protein domain protein n=1 Tax=Legionella pneumophila serogroup 1 (strain 2300/99 Alcoy) RepID=D5TD22_LEGP2
Tfp type 4 fimbrial pilin like signal peptide protein domain protein
Tfp type 4 fimbrial pilin like signal peptide protein domain protein {ECO:0000313|EMBL:ADG24756.1}; TaxID=423212 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella pneumophila serogroup 1 (strain 2300/99 Alcoy).;"
SCNpilot_expt_1000_bf_scaffold_1665_11
unknown

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comp(10519..10923)
DNA (405bp) protein (135aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_1665_12
Legionella longbeachae, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10996..13554)
DNA (2559bp) protein (853aa)
Putative phospholipase, patatin family n=2 Tax=Legionella longbeachae RepID=D3HTC6_LEGLN rbh
phospholipase, patatin family; K07001 NTE family protein rbh
Putative phospholipase, patatin family {ECO:0000313|EMBL:CBJ12168.1}; TaxID=661367 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella longbeachae serogroup 1 (strain NSW150).;"
SCNpilot_expt_1000_bf_scaffold_1665_13
Legionella longbeachae, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13720..14430)
DNA (711bp) protein (237aa)
pyrF; orotidine 5`-phosphate decarboxylase (EC:4.1.1.23); K01591 orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
Orotidine 5'-phosphate decarboxylase {ECO:0000256|HAMAP-Rule:MF_01200, ECO:0000256|RuleBase:RU000512}; EC=4.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01200, ECO:0000256|RuleBase:RU000512};; OMP decarboxylase {ECO:0000256|HAMAP-Rule:MF_01200}; TaxID=661367 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella longbeachae serogroup 1 (strain NSW150).;"
Orotidine 5'-phosphate decarboxylase n=2 Tax=Legionella longbeachae RepID=D3HTC9_LEGLN
SCNpilot_expt_1000_bf_scaffold_1665_14
Legionella drancourtii, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14427..15545)
DNA (1119bp) protein (373aa)
polysaccharide biosynthesis protein; K13017 UDP-3-keto-D-GlcNAcA aminotransferase [EC:2.6.1.-] rbh
Aminotransferase n=1 Tax=Legionella drancourtii LLAP12 RepID=G9ENL1_9GAMM rbh
Aminotransferase {ECO:0000313|EMBL:EHL31124.1}; TaxID=658187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella drancourtii LLAP12.;"
SCNpilot_expt_1000_bf_scaffold_1665_15
Legionella drancourtii, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15625..16803)
DNA (1179bp) protein (393aa)
hypothetical protein n=1 Tax=Fluoribacter dumoffii RepID=UPI00026C7BD7 rbh
Lipopolysaccharide assembly protein B {ECO:0000256|HAMAP-Rule:MF_00994}; TaxID=658187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella drancourtii LLAP12.;"
hypothetical protein rbh
SCNpilot_expt_1000_bf_scaffold_1665_16
Legionella drancourtii, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16846..17136)
DNA (291bp) protein (97aa)
Putative uncharacterized protein n=1 Tax=Legionella drancourtii LLAP12 RepID=G9ENL3_9GAMM
Putative uncharacterized protein {ECO:0000313|EMBL:EHL31126.1}; TaxID=658187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella drancourtii LLAP12.;"
hypothetical protein; K08992 putative membrane protein
SCNpilot_expt_1000_bf_scaffold_1665_17
Legionella longbeachae, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(17299..18987)
DNA (1689bp) protein (563aa)
30S ribosomal protein S1 n=1 Tax=Legionella shakespearei RepID=UPI0003827DAD rbh
rpsA; 30S ribosomal protein S1; K02945 small subunit ribosomal protein S1 rbh
30S ribosomal protein S1 {ECO:0000256|PIRNR:PIRNR002111, ECO:0000313|EMBL:CBJ12175.1}; TaxID=661367 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella longbeachae serogroup 1 (strain NSW150).;"
SCNpilot_expt_1000_bf_scaffold_1665_18
Legionella drancourtii, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19079..19774)
DNA (696bp) protein (232aa)
Cytidylate kinase {ECO:0000256|HAMAP-Rule:MF_00238}; Short=CK {ECO:0000256|HAMAP-Rule:MF_00238};; EC=2.7.4.25 {ECO:0000256|HAMAP-Rule:MF_00238};; Cytidine monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00238}; TaxID=658187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella drancourtii LLAP12.;"
kcy; cytidylate kinase (EC:2.7.4.14); K00945 cytidylate kinase [EC:2.7.4.14]
Cytidylate kinase n=1 Tax=Legionella drancourtii LLAP12 RepID=G9ENL7_9GAMM rbh
SCNpilot_expt_1000_bf_scaffold_1665_19
Legionella drancourtii, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19767..21086)
DNA (1320bp) protein (440aa)
3-phosphoshikimate 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531}; EC=2.5.1.19 {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531};; 5-enolpyruvylshikimate-3-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00210}; TaxID=658187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella drancourtii LLAP12.;"
aroA; 3-phosphoshikimate 1-carboxyvinyltransferase (EC:2.5.1.19); K00800 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19] rbh
3-phosphoshikimate 1-carboxyvinyltransferase n=1 Tax=Legionella drancourtii LLAP12 RepID=G9ENL8_9GAMM rbh
SCNpilot_expt_1000_bf_scaffold_1665_20
Legionella drancourtii, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21083..22177)
DNA (1095bp) protein (365aa)
Phosphoserine aminotransferase {ECO:0000256|HAMAP-Rule:MF_00160, ECO:0000256|RuleBase:RU004505}; EC=2.6.1.52 {ECO:0000256|HAMAP-Rule:MF_00160, ECO:0000256|RuleBase:RU004505};; Phosphohydroxythreonine aminotransferase {ECO:0000256|HAMAP-Rule:MF_00160}; TaxID=658187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella drancourtii LLAP12.;"
serC; phosphoserine aminotransferase (EC:2.6.1.52); K00831 phosphoserine aminotransferase [EC:2.6.1.52] rbh
hypothetical protein n=1 Tax=Legionella shakespearei RepID=UPI0003758202 rbh
SCNpilot_expt_1000_bf_scaffold_1665_21
Legionella drancourtii, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(22155..24113)
DNA (1959bp) protein (653aa)
DNA gyrase subunit A {ECO:0000256|HAMAP-Rule:MF_01897}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01897};; TaxID=658187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella drancourtii LLAP12.;"
gyrA; DNA gyrase, subunit A, type II topoisomerase (EC:5.99.1.3); K02469 DNA gyrase subunit A [EC:5.99.1.3]
DNA gyrase subunit A n=1 Tax=Legionella drancourtii LLAP12 RepID=G9ENM0_9GAMM rbh
Displaying 21 items

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