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SCNpilot_expt_1000_bf_scaffold_4185

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_4185_1
Legionella drancourtii, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..547)
DNA (546bp) protein (182aa)
Protein translocase subunit SecD n=1 Tax=Legionella drancourtii LLAP12 RepID=G9EMC0_9GAMM
Protein translocase subunit SecD {ECO:0000256|HAMAP-Rule:MF_01463}; TaxID=658187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella drancourtii LLAP12.;"
secD; protein-export membrane protein SecD; K03072 preprotein translocase subunit SecD
SCNpilot_expt_1000_bf_scaffold_4185_2
Legionella longbeachae, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(566..901)
DNA (336bp) protein (112aa)
preprotein translocase subunit YajC n=1 Tax=Fluoribacter dumoffii RepID=UPI00026C7859
yajC; SecYEG protein translocase auxillary subunit; K03210 preprotein translocase subunit YajC
SecYEG protein translocase auxillary subunit {ECO:0000313|EMBL:CBJ11278.1}; TaxID=661367 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella longbeachae serogroup 1 (strain NSW150).;"
SCNpilot_expt_1000_bf_scaffold_4185_3
Legionella drancourtii, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1019..2245)
DNA (1227bp) protein (409aa)
Thiamine-phosphate synthase {ECO:0000256|RuleBase:RU003826}; EC=2.5.1.3 {ECO:0000256|RuleBase:RU003826};; Thiamine-phosphate pyrophosphorylase {ECO:0000256|RuleBase:RU003826}; TaxID=658187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella drancourtii LLAP12.;"
thiDE; phosphomethylpyrimidine kinase/thiamin-phosphate pyrophosphorylase (EC:2.5.1.3); K14153 hydroxymethylpyrimidine kinase / phosphomethylpyrimidine kinase / thiamine-phosphate diphosphorylase [EC:2.7.1.49 2.7.4.7 2.5.1.3] rbh
Thiamine-phosphate synthase n=1 Tax=Legionella drancourtii LLAP12 RepID=G9EMC3_9GAMM rbh
SCNpilot_expt_1000_bf_scaffold_4185_4
Legionella drancourtii, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2272..2742)
DNA (471bp) protein (157aa)
Putative uncharacterized protein n=1 Tax=Legionella drancourtii LLAP12 RepID=G9EMC7_9GAMM
Putative uncharacterized protein {ECO:0000313|EMBL:EHL31727.1}; TaxID=658187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella drancourtii LLAP12.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_4185_5
Legionella drancourtii, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2763..3599)
DNA (837bp) protein (279aa)
tgt; queuine tRNA-ribosyltransferase; K00773 queuine tRNA-ribosyltransferase [EC:2.4.2.29]
Putative uncharacterized protein n=1 Tax=Legionella drancourtii LLAP12 RepID=G9EMC9_9GAMM
Putative uncharacterized protein {ECO:0000313|EMBL:EHL31729.1}; TaxID=658187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella drancourtii LLAP12.;"
SCNpilot_expt_1000_bf_scaffold_4185_6
Legionella longbeachae, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3609..4622)
DNA (1014bp) protein (338aa)
queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase; K07568 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:5.-.-.-] rbh
S-adenosylmethionine:tRNA ribosyltransferase-isomerase {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094456}; EC=2.4.99.17 {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094434};; Queuosine biosynthesis protein QueA {ECO:0000256|HAMAP-Rule:MF_00113}; TaxID=661367 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella longbeachae serogroup 1 (strain NSW150).;"
S-adenosylmethionine:tRNA ribosyltransferase-isomerase n=2 Tax=Legionella longbeachae RepID=D3HQU0_LEGLN rbh
SCNpilot_expt_1000_bf_scaffold_4185_7
Legionella drancourtii, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4719..5129)
DNA (411bp) protein (137aa)
Putative uncharacterized protein n=1 Tax=Legionella drancourtii LLAP12 RepID=G9EMD2_9GAMM
Putative uncharacterized protein {ECO:0000313|EMBL:EHL31732.1}; TaxID=658187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella drancourtii LLAP12.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_4185_8
Legionella drancourtii, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5163..6173)
DNA (1011bp) protein (337aa)
ABC transporter ATP binding protein n=1 Tax=Legionella drancourtii LLAP12 RepID=G9EMD3_9GAMM
ABC transporter ATP binding protein {ECO:0000313|EMBL:EHL31733.1}; TaxID=658187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella drancourtii LLAP12.;"
uup-A; ABC transporter ATP binding protein
SCNpilot_expt_1000_bf_scaffold_4185_9
Legionella drancourtii, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6179..6991)
DNA (813bp) protein (271aa)
ABC transporter ATP binding protein n=1 Tax=Legionella drancourtii LLAP12 RepID=G9EMD3_9GAMM
ABC transporter ATP binding protein {ECO:0000313|EMBL:EHL31733.1}; TaxID=658187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella drancourtii LLAP12.;"
uup; ABC transporter ATP-binding protein; K15738 ATP-binding cassette, subfamily F, uup
SCNpilot_expt_1000_bf_scaffold_4185_10
Legionella drancourtii, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7063..7446)
DNA (384bp) protein (128aa)
Endoribonuclease L-PSP n=1 Tax=Legionella drancourtii LLAP12 RepID=G9EMD4_9GAMM
Endoribonuclease L-PSP {ECO:0000313|EMBL:EHL31734.1}; TaxID=658187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella drancourtii LLAP12.;"
tdcF; L-PSP (mRNA) endoribonuclease; K07567 TdcF protein
SCNpilot_expt_1000_bf_scaffold_4185_11
Legionella drancourtii, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7446..9614)
DNA (2169bp) protein (723aa)
spoT; guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase (EC:2.7.6.5); K01139 guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase [EC:3.1.7.2] rbh
Putative uncharacterized protein n=1 Tax=Legionella drancourtii LLAP12 RepID=G9EMD5_9GAMM rbh
Putative uncharacterized protein {ECO:0000313|EMBL:EHL31735.1}; TaxID=658187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella drancourtii LLAP12.;"
SCNpilot_expt_1000_bf_scaffold_4185_12
Legionella drancourtii, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9995..10198)
DNA (204bp) protein (68aa)
DNA-directed RNA polymerase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00054253}; Short=RNAP omega subunit {ECO:0000256|HAMAP-Rule:MF_00366};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00094401};; RNA polymerase omega subunit {ECO:0000256|HAMAP-Rule:MF_00366}; Transcriptase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366}; TaxID=658187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella dranc
rpoZ; RNA polymerase omega subunit; K03060 DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
DNA-directed RNA polymerase subunit omega n=1 Tax=Legionella shakespearei RepID=UPI000380B1DE
SCNpilot_expt_1000_bf_scaffold_4185_13
Legionella drancourtii, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10893..11759)
DNA (867bp) protein (289aa)
Putative uncharacterized protein n=1 Tax=Legionella drancourtii LLAP12 RepID=G9EMD8_9GAMM rbh
Putative uncharacterized protein {ECO:0000313|EMBL:EHL31738.1}; TaxID=658187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella drancourtii LLAP12.;"
hypothetical protein rbh
SCNpilot_expt_1000_bf_scaffold_4185_14
Legionella drancourtii, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11960..13054
DNA (1095bp) protein (365aa)
Putative uncharacterized protein n=1 Tax=Legionella drancourtii LLAP12 RepID=G9EMF2_9GAMM
Putative uncharacterized protein {ECO:0000313|EMBL:EHL31488.1}; TaxID=658187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella drancourtii LLAP12.;"
SCNpilot_expt_1000_bf_scaffold_4185_15
Legionella drancourtii, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13083..13916)
DNA (834bp) protein (278aa)
Putative uncharacterized protein n=1 Tax=Legionella drancourtii LLAP12 RepID=G9EMF5_9GAMM
Putative uncharacterized protein {ECO:0000313|EMBL:EHL31491.1}; TaxID=658187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella drancourtii LLAP12.;"
Mitochondrial Carrier (MC) Family
SCNpilot_expt_1000_bf_scaffold_4185_16
unknown

Not on your lists

comp(14005..14124)
DNA (120bp) protein (40aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_4185_17
unknown

Not on your lists

comp(14263..15783)
DNA (1521bp) protein (507aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_4185_18
Legionella longbeachae, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16006..16713
DNA (708bp) protein (236aa)
rph; ribonuclease PH (RNase PH) (tRNA nucleotidyltransferase) (EC:2.7.7.56); K00989 ribonuclease PH [EC:2.7.7.56] rbh
Ribonuclease PH {ECO:0000256|HAMAP-Rule:MF_00564, ECO:0000256|SAAS:SAAS00104182}; Short=RNase PH {ECO:0000256|HAMAP-Rule:MF_00564};; EC=2.7.7.56 {ECO:0000256|HAMAP-Rule:MF_00564, ECO:0000256|SAAS:SAAS00104188};; tRNA nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_00564}; TaxID=661367 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella longbeachae serogroup 1 (strain NSW150).;"
ribonuclease PH n=1 Tax=Fluoribacter dumoffii RepID=UPI00026C7793 rbh
SCNpilot_expt_1000_bf_scaffold_4185_19
Legionella drancourtii, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17589..17822
DNA (234bp) protein (78aa)
Putative uncharacterized protein n=1 Tax=Legionella drancourtii LLAP12 RepID=G9EMG0_9GAMM
Putative uncharacterized protein {ECO:0000313|EMBL:EHL31496.1}; TaxID=658187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella drancourtii LLAP12.;"
Integral membrane protein YggT, involved in response to extracytoplasmic stress (osmotic shock)
Displaying 19 items

View Taxonomy