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SCNpilot_expt_1000_bf_scaffold_6426

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_6426_1
Legionella drancourtii, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(308..934)
DNA (627bp) protein (209aa)
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU000549};; Endopeptidase Clp {ECO:0000256|HAMAP-Rule:MF_00444}; TaxID=658187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella drancourtii LLAP12.;"
ATP-dependent Clp protease, proteolytic subunit ClpP; K01358 ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] rbh
ATP-dependent Clp protease proteolytic subunit n=1 Tax=Legionella drancourtii LLAP12 RepID=G9ER12_9GAMM rbh
SCNpilot_expt_1000_bf_scaffold_6426_2
Legionella drancourtii, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(939..2282)
DNA (1344bp) protein (448aa)
Trigger factor {ECO:0000256|HAMAP-Rule:MF_00303, ECO:0000256|RuleBase:RU003914}; Short=TF {ECO:0000256|HAMAP-Rule:MF_00303};; EC=5.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00303};; PPIase {ECO:0000256|HAMAP-Rule:MF_00303}; TaxID=658187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella drancourtii LLAP12.;"
Trigger factor n=1 Tax=Legionella drancourtii LLAP12 RepID=G9ER11_9GAMM rbh
trigger factor TF (FKBP-type peptidyl prolyl cis-trans isomerase); K03545 trigger factor rbh
SCNpilot_expt_1000_bf_scaffold_6426_3
unknown

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2306..2590
DNA (285bp) protein (95aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_6426_4
Legionella pneumophila, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

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3005..4222
DNA (1218bp) protein (406aa)
Site specific recombinase, phage integrase n=2 Tax=Legionella pneumophila RepID=A5ID19_LEGPC rbh
site specific recombinase, phage integrase rbh
Site-specific tyrosine recombinase XerC {ECO:0000313|EMBL:GAN23917.1}; TaxID=446 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella pneumophila.;"
SCNpilot_expt_1000_bf_scaffold_6426_5
Legionella longbeachae, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

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5031..6155
DNA (1125bp) protein (375aa)
ABC transporter ATP-binding domain-containing protein n=2 Tax=Legionella longbeachae RepID=D1RFM7_LEGLO rbh
yheS; fused transporter subunits of ABC superfamily: ATP-binding components; K06158 ATP-binding cassette, subfamily F, member 3 rbh
Putative fused transporter subunits of ABC superfamily: ATP-binding components {ECO:0000313|EMBL:CBJ11639.1}; TaxID=661367 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella longbeachae serogroup 1 (strain NSW150).;"
SCNpilot_expt_1000_bf_scaffold_6426_6
Legionella fallonii, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6150..7010)
DNA (861bp) protein (287aa)
Putative uncharacterized protein n=1 Tax=Legionella drancourtii LLAP12 RepID=G9ESC5_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:CEG55849.1}; TaxID=1212491 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella fallonii LLAP-10.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_6426_7
Legionella drancourtii, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7034..7711)
DNA (678bp) protein (226aa)
Ribonuclease 3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231299}; EC=3.1.26.3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231445};; Ribonuclease III {ECO:0000256|HAMAP-Rule:MF_00104}; TaxID=658187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella drancourtii LLAP12.;"
rnc; ribonuclease III (EC:3.1.26.3); K03685 ribonuclease III [EC:3.1.26.3] rbh
Ribonuclease 3 n=1 Tax=Legionella drancourtii LLAP12 RepID=G9ER02_9GAMM rbh
SCNpilot_expt_1000_bf_scaffold_6426_8
Legionella drancourtii, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7791..8546)
DNA (756bp) protein (252aa)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; TaxID=658187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella drancourtii LLAP12.;"
lepB; Signal peptidase I (EC:3.4.21.89); K03100 signal peptidase I [EC:3.4.21.89] rbh
Signal peptidase I (LepB-1) n=1 Tax=Legionella drancourtii LLAP12 RepID=G9ER00_9GAMM rbh
SCNpilot_expt_1000_bf_scaffold_6426_9
Legionella drancourtii, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8634..9998)
DNA (1365bp) protein (455aa)
Elongation factor 4 {ECO:0000256|HAMAP-Rule:MF_00071}; Short=EF-4 {ECO:0000256|HAMAP-Rule:MF_00071};; EC=3.6.5.n1 {ECO:0000256|HAMAP-Rule:MF_00071};; Ribosomal back-translocase LepA {ECO:0000256|HAMAP-Rule:MF_00071}; TaxID=658187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella drancourtii LLAP12.;"
Elongation factor 4 n=1 Tax=Legionella drancourtii LLAP12 RepID=G9EQZ9_9GAMM rbh
lepA; GTP-binding membrane protein; K03596 GTP-binding protein LepA
Displaying 9 items

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