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SCNpilot_expt_1000_bf_scaffold_2435

Search features with annotation key words

Displaying items 1-30 of 53 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_2435_1
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..536)
DNA (534bp) protein (178aa)
Hypoxanthine phosphoribosyltransferase {ECO:0000313|EMBL:CDX34377.1}; EC=2.4.2.8 {ECO:0000313|EMBL:CDX34377.1};; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
hypoxanthine phosphoribosyltransferase (EC:2.4.2.8); K00760 hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
Hypoxanthine phosphoribosyltransferase n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y4B7_9RHIZ
SCNpilot_expt_1000_bf_scaffold_2435_2
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(536..868)
DNA (333bp) protein (111aa)
Uncharacterized protein n=1 Tax=Nitratireductor indicus C115 RepID=K2NRE1_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EKF40414.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_2435_3
unknown

Not on your lists

comp(868..1152)
DNA (285bp) protein (95aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_2435_4
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1346..1969
DNA (624bp) protein (208aa)
cell division protein FtsE n=1 Tax=Hoeflea sp. 108 RepID=UPI00036E6A2D
Cell division ATP-binding protein FtsE {ECO:0000313|EMBL:EHK58027.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
cell division ATP-binding protein FtsE
SCNpilot_expt_1000_bf_scaffold_2435_5
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1962..2954
DNA (993bp) protein (331aa)
UPI0003CF34FE related cluster n=1 Tax=unknown RepID=UPI0003CF34FE
Cell division protein ftsX {ECO:0000313|EMBL:AID32714.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
cell division protein FtsX; K09811 cell division transport system permease protein
SCNpilot_expt_1000_bf_scaffold_2435_6
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3081..3773
DNA (693bp) protein (231aa)
Uncharacterized protein n=1 Tax=Nitratireductor indicus C115 RepID=K2NZ88_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EKF40411.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_2435_7
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3832..4644
DNA (813bp) protein (271aa)
phospholipid/glycerol acyltransferase; K00655 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
UPI0003CEECB5 related cluster n=1 Tax=unknown RepID=UPI0003CEECB5
1-acyl-sn-glycerol-3-phosphate acyltransferase {ECO:0000313|EMBL:ESW82502.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
SCNpilot_expt_1000_bf_scaffold_2435_8
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4656..5222)
DNA (567bp) protein (189aa)
ChaC-like protein n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2N0N6_9RHIZ
ChaC-like protein {ECO:0000313|EMBL:EKF17803.1}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
ChaC-like protein; K07232 cation transport protein ChaC
SCNpilot_expt_1000_bf_scaffold_2435_9
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5299..6294
DNA (996bp) protein (332aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI00030B531D
Putative uncharacterized protein {ECO:0000313|EMBL:EHK58033.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_2435_10
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6462..7397)
DNA (936bp) protein (312aa)
Protein TyrC {ECO:0000313|EMBL:CDX42523.1}; EC=1.3.1.12 {ECO:0000313|EMBL:CDX42523.1};; EC=1.3.1.43 {ECO:0000313|EMBL:CDX42523.1};; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
cyclohexadienyl dehydrogenase (EC:1.3.1.12); K00220 cyclohexadieny/prephenate dehydrogenase [EC:1.3.1.43 1.3.1.12]
cyclohexadienyl dehydrogenase n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0003793A44
SCNpilot_expt_1000_bf_scaffold_2435_11
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7394..8497)
DNA (1104bp) protein (368aa)
Histidinol-phosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_01023}; EC=2.6.1.9 {ECO:0000256|HAMAP-Rule:MF_01023};; Imidazole acetol-phosphate transaminase {ECO:0000256|HAMAP-Rule:MF_01023}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
histidinol-phosphate aminotransferase; K00817 histidinol-phosphate aminotransferase [EC:2.6.1.9] rbh
Histidinol-phosphate aminotransferase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HMN2_9RHIZ
SCNpilot_expt_1000_bf_scaffold_2435_12
Nitratireductor aquibiodomus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8712..9662
DNA (951bp) protein (317aa)
Homoserine O-succinyltransferase {ECO:0000256|HAMAP-Rule:MF_00295, ECO:0000256|SAAS:SAAS00084556}; EC=2.3.1.46 {ECO:0000256|HAMAP-Rule:MF_00295, ECO:0000256|SAAS:SAAS00084596};; Homoserine O-transsuccinylase {ECO:0000256|HAMAP-Rule:MF_00295}; TaxID=1189611 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor aquibiodomus RA22.;"
homoserine O-succinyltransferase; K00651 homoserine O-succinyltransferase [EC:2.3.1.46] rbh
Homoserine O-succinyltransferase n=1 Tax=Nitratireductor aquibiodomus RA22 RepID=I5BSI0_9RHIZ rbh
SCNpilot_expt_1000_bf_scaffold_2435_13
unknown

Not on your lists

9683..10576
DNA (894bp) protein (298aa)
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI00037D4950
SCNpilot_expt_1000_bf_scaffold_2435_14
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10534..11124)
DNA (591bp) protein (197aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FGT6_9RHIZ
Type 11 methyltransferase {ECO:0000313|EMBL:CDX38280.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
type 11 methyltransferase
SCNpilot_expt_1000_bf_scaffold_2435_15
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11519..12286
DNA (768bp) protein (256aa)
Hydroxyacylglutathione hydrolase {ECO:0000256|HAMAP-Rule:MF_01374, ECO:0000256|SAAS:SAAS00035352}; EC=3.1.2.6 {ECO:0000256|HAMAP-Rule:MF_01374, ECO:0000256|SAAS:SAAS00035352};; Glyoxalase II {ECO:0000256|HAMAP-Rule:MF_01374}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
hydroxyacylglutathione hydrolase; K01069 hydroxyacylglutathione hydrolase [EC:3.1.2.6]
Hydroxyacylglutathione hydrolase n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FDG4_9RHIZ
SCNpilot_expt_1000_bf_scaffold_2435_16
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12296..12967)
DNA (672bp) protein (224aa)
hypothetical protein n=1 Tax=Rhizobium loti RepID=UPI000370EB8F
Uncharacterized protein {ECO:0000313|EMBL:CDX42584.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_2435_17
Nitratireductor aquibiodomus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12964..13854)
DNA (891bp) protein (297aa)
Uncharacterized protein n=1 Tax=Nitratireductor aquibiodomus RA22 RepID=I5BSI6_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:EIM72538.1}; TaxID=1189611 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor aquibiodomus RA22.;"
hypothetical protein rbh
SCNpilot_expt_1000_bf_scaffold_2435_18
Thioclava pacifica, Thioclava, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14282..15337
DNA (1056bp) protein (352aa)
UPI0003CE19B0 related cluster n=1 Tax=unknown RepID=UPI0003CE19B0
Phosphate-binding protein PstS {ECO:0000256|PIRNR:PIRNR002756}; TaxID=1353537 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Thioclava.;" source="Thioclava pacifica DSM 10166.;"
high-affinity phosphate transport protein, ABC superfamily, peri_bind
SCNpilot_expt_1000_bf_scaffold_2435_19
Mesorhizobium sp. LNHC209A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15398..16381
DNA (984bp) protein (328aa)
UPI0003D06570 related cluster n=1 Tax=unknown RepID=UPI0003D06570
phosphate ABC transporter, permease protein PstC
Phosphate transporter permease subunit PstC {ECO:0000313|EMBL:ESY97833.1}; TaxID=1287226 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC209A00.;"
SCNpilot_expt_1000_bf_scaffold_2435_20
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16386..17222
DNA (837bp) protein (279aa)
UPI0003CEE682 related cluster n=1 Tax=unknown RepID=UPI0003CEE682
Phosphate transporter permease subunit PtsA {ECO:0000313|EMBL:ESW81093.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
phosphate ABC transporter permease; K02038 phosphate transport system permease protein
SCNpilot_expt_1000_bf_scaffold_2435_21
Mesorhizobium sp. LNHC252B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17219..18031
DNA (813bp) protein (271aa)
Phosphate import ATP-binding protein PstB {ECO:0000256|HAMAP-Rule:MF_01702}; EC=3.6.3.27 {ECO:0000256|HAMAP-Rule:MF_01702};; ABC phosphate transporter {ECO:0000256|HAMAP-Rule:MF_01702}; Phosphate-transporting ATPase {ECO:0000256|HAMAP-Rule:MF_01702}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;"
phosphate ABC transporter ATPase (EC:3.6.3.27); K02036 phosphate transport system ATP-binding protein [EC:3.6.3.27]
UPI0003CDE4A2 related cluster n=1 Tax=unknown RepID=UPI0003CDE4A2
SCNpilot_expt_1000_bf_scaffold_2435_22
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18054..18755
DNA (702bp) protein (234aa)
UPI0003D0298B related cluster n=1 Tax=unknown RepID=UPI0003D0298B
Phosphate-specific transport system accessory protein PhoU {ECO:0000256|PIRNR:PIRNR003107}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
phosphate uptake regulator PhoU; K02039 phosphate transport system protein
SCNpilot_expt_1000_bf_scaffold_2435_23
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18771..19454
DNA (684bp) protein (228aa)
PREDICTED: probable transcriptional regulator ycf27-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C17CEB
phosphate regulon transcriptional regulatory protein PhoB; K07657 two-component system, OmpR family, phosphate regulon response regulator PhoB
Response regulator in two-component regulatory system with PhoR (Or CreC), regulation of Pi uptake (OmpR family) {ECO:0000313|EMBL:CDX34615.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
SCNpilot_expt_1000_bf_scaffold_2435_24
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19523..19921
DNA (399bp) protein (133aa)
XRE family transcriptional regulator n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7F9P6_9RHIZ
hypothetical protein
XRE family transcriptional regulator {ECO:0000313|EMBL:ESX60188.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;"
SCNpilot_expt_1000_bf_scaffold_2435_25
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19887..20405
DNA (519bp) protein (173aa)
Uncharacterized protein n=1 Tax=Sinorhizobium fredii USDA 257 RepID=I3X699_RHIFR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFL51405.1}; TaxID=1185652 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium fredii USDA 257.;"
SCNpilot_expt_1000_bf_scaffold_2435_26
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20419..21207)
DNA (789bp) protein (263aa)
ROK family transcriptional regulator n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FDP1_9RHIZ
ROK family transcriptional regulator {ECO:0000313|EMBL:ESX68745.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;"
ROK family protein
SCNpilot_expt_1000_bf_scaffold_2435_27
unknown

Not on your lists

21526..21747
DNA (222bp) protein (74aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_2435_28
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21924..22883
DNA (960bp) protein (320aa)
xylose ABC transporter substrate-binding protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00037D8B5D
D-xylose ABC transporter periplasmic substrate-binding protein {ECO:0000313|EMBL:EHK58135.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
D-xylose ABC transporter, substrate-binding protein
SCNpilot_expt_1000_bf_scaffold_2435_29
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23135..24487
DNA (1353bp) protein (451aa)
Inner-membrane translocator n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HMC2_9RHIZ
Inner-membrane translocator {ECO:0000313|EMBL:EHK58136.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
inner-membrane translocator; K10544 D-xylose transport system permease protein
SCNpilot_expt_1000_bf_scaffold_2435_30
Mesorhizobium sp. LNHC220B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24497..25288
DNA (792bp) protein (264aa)
UPI0003CE7585 related cluster n=1 Tax=unknown RepID=UPI0003CE7585
Sugar ABC transporter ATP-binding protein {ECO:0000313|EMBL:ESY84653.1}; TaxID=1287232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC220B00.;"
ABC-type sugar transport system, ATPase component
Displaying items 1-30 of 53 in total

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