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SCNpilot_expt_1000_bf_scaffold_1848

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_1848_1
Nitratireductor aquibiodomus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..1421
DNA (1419bp) protein (473aa)
Succinate dehydrogenase flavoprotein subunit {ECO:0000256|RuleBase:RU362051}; EC=1.3.5.1 {ECO:0000256|RuleBase:RU362051};; TaxID=1189611 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor aquibiodomus RA22.;"
sdhA; succinate dehydrogenase flavoprotein subunit; K00239 succinate dehydrogenase flavoprotein subunit [EC:1.3.99.1]
Succinate dehydrogenase flavoprotein subunit n=1 Tax=Nitratireductor aquibiodomus RA22 RepID=I5C037_9RHIZ
SCNpilot_expt_1000_bf_scaffold_1848_2
Nitratireductor basaltis, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1437..2216
DNA (780bp) protein (260aa)
sdhB; succinate dehydrogenase iron-sulfur subunit; K00240 succinate dehydrogenase iron-sulfur subunit [EC:1.3.99.1] rbh
Succinate dehydrogenase iron-sulfur subunit n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HLA1_9RHIZ rbh
Succinate dehydrogenase iron-sulfur subunit {ECO:0000313|EMBL:KFB08714.1}; TaxID=472175 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor basaltis.;"
SCNpilot_expt_1000_bf_scaffold_1848_3
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2342..2944
DNA (603bp) protein (201aa)
Peptide methionine sulfoxide reductase MsrA {ECO:0000256|HAMAP-Rule:MF_01401}; Short=Protein-methionine-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401};; EC=1.8.4.11 {ECO:0000256|HAMAP-Rule:MF_01401};; Peptide-methionine (S)-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
msrA2; peptide methionine sulfoxide reductase MsrA; K07304 peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002E15FC7
SCNpilot_expt_1000_bf_scaffold_1848_4
Mesorhizobium sp. LNHC252B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3098..3523)
DNA (426bp) protein (142aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI000379491D
peroxiredoxin, OsmC subfamily
Ornithine cyclodeaminase {ECO:0000313|EMBL:ESY70710.1}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;"
SCNpilot_expt_1000_bf_scaffold_1848_5
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3686..4726)
DNA (1041bp) protein (347aa)
DNA polymerase III subunit delta n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YHS4_9RHIZ
DNA polymerase III subunit delta {ECO:0000313|EMBL:EHH07251.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
DNA polymerase III, delta subunit
SCNpilot_expt_1000_bf_scaffold_1848_6
Mesorhizobium sp. LNJC399B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4736..5608)
DNA (873bp) protein (291aa)
citryl-CoA lyase (EC:4.1.3.34); K01644 citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.6 4.1.3.34]
UPI0003CE8AF4 related cluster n=1 Tax=unknown RepID=UPI0003CE8AF4
ATP-binding protein {ECO:0000313|EMBL:ESY01669.1}; TaxID=1287277 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNJC399B00.;"
SCNpilot_expt_1000_bf_scaffold_1848_7
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5737..6906
DNA (1170bp) protein (390aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HL13_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EHK58596.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
FAD dependent oxidoreductase
SCNpilot_expt_1000_bf_scaffold_1848_8
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6855..7619)
DNA (765bp) protein (255aa)
Uncharacterized protein n=1 Tax=Pseudomonas putida CSV86 RepID=L1M0L0_PSEPU
Uncharacterized protein {ECO:0000313|EMBL:KGM34036.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1848_9
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7707..8312
DNA (606bp) protein (202aa)
3-isopropylmalate dehydratase small subunit {ECO:0000256|HAMAP-Rule:MF_01031}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01031};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01031}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01031}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
leuD; isopropylmalate isomerase small subunit (EC:4.2.1.33); K01704 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
3-isopropylmalate dehydratase small subunit n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HL11_9RHIZ
SCNpilot_expt_1000_bf_scaffold_1848_10
Mesorhizobium sp. L103C119B0, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8364..9194
DNA (831bp) protein (277aa)
UPI0003CE86F1 related cluster n=1 Tax=unknown RepID=UPI0003CE86F1
Uncharacterized protein {ECO:0000313|EMBL:ESZ69471.1}; TaxID=1287085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L103C119B0.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1848_11
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9208..9588
DNA (381bp) protein (127aa)
endoribonuclease L-PSP n=1 Tax=Rhizobium loti RepID=UPI000375ADD4
Endoribonuclease L-PSP family protein {ECO:0000313|EMBL:AID33385.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1848_12
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9678..10793
DNA (1116bp) protein (372aa)
3-isopropylmalate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445}; EC=1.1.1.85 {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445};; 3-IPM-DH {ECO:0000256|HAMAP-Rule:MF_01033}; Beta-IPM dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
3-isopropylmalate dehydrogenase; K00052 3-isopropylmalate dehydrogenase [EC:1.1.1.85] rbh
3-isopropylmalate dehydrogenase n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0003068614 rbh
SCNpilot_expt_1000_bf_scaffold_1848_13
Mesorhizobium sp. LNHC221B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10840..11520)
DNA (681bp) protein (227aa)
UPI0003CEFC0A related cluster n=1 Tax=unknown RepID=UPI0003CEFC0A
Uncharacterized protein {ECO:0000313|EMBL:ESY73652.1}; TaxID=1287233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC221B00.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1848_14
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11586..11792)
DNA (207bp) protein (69aa)
UPI0003D041E1 related cluster n=1 Tax=unknown RepID=UPI0003D041E1
UPF0434 protein MPL3356_70178 {ECO:0000256|HAMAP-Rule:MF_01187}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
hypothetical protein; K09791 hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1848_15
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11789..12454)
DNA (666bp) protein (222aa)
Peptidase S16 lon domain-containing protein n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YD61_9RHIZ
Peptidase S16 lon domain-containing protein {ECO:0000313|EMBL:CDX26072.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
peptidase S16 lon domain-containing protein; K07157
Displaying 15 items

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