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SCNpilot_expt_1000_bf_scaffold_11207

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_11207_1
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..1007)
DNA (1005bp) protein (335aa)
UPI0003CE5AA9 related cluster n=1 Tax=unknown RepID=UPI0003CE5AA9
Uncharacterized protein {ECO:0000313|EMBL:CDX58954.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_11207_2
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1230..2033
DNA (804bp) protein (268aa)
Aau3 protein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98L76_RHILO
Protein aau3 {ECO:0000313|EMBL:CDX12424.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
rirA; iron-responsive transcriptional regulator; K13772 Rrf2 family transcriptional regulator, iron-responsive regulator
SCNpilot_expt_1000_bf_scaffold_11207_3
unknown

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2109..2318
DNA (210bp) protein (70aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_11207_4
unknown

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2327..2539
DNA (213bp) protein (71aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_11207_5
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2578..2901
DNA (324bp) protein (108aa)
antibiotic biosynthesis monooxygenase n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI00030383B0
Antibiotic biosynthesis monooxygenase {ECO:0000313|EMBL:EHK56219.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
antibiotic biosynthesis monooxygenase; K07145
SCNpilot_expt_1000_bf_scaffold_11207_6
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2964..4280)
DNA (1317bp) protein (439aa)
Fused DNA-binding transcriptional regulator proline dehydrogenase pyrroline-5-carboxylate dehydrogenase {ECO:0000313|EMBL:CDX44553.1}; EC=1.2.1.88 {ECO:0000313|EMBL:CDX44553.1};; EC=1.5.5.2 {ECO:0000313|EMBL:CDX44553.1};; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI00035C5C1A
delta-1-pyrroline-5-carboxylate dehydrogenase
SCNpilot_expt_1000_bf_scaffold_11207_7
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4274..6559)
DNA (2286bp) protein (762aa)
bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase (EC:1.5.1.12 1.5.99.8); K13821 proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.99.8 1.5.1.12]
bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase n=1 Tax=Rhizobium loti RepID=UPI00036DB28F
Delta-1-pyrroline-5-carboxylate dehydrogenase {ECO:0000313|EMBL:AID30620.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
SCNpilot_expt_1000_bf_scaffold_11207_8
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6697..7152
DNA (456bp) protein (152aa)
DNA-binding transcriptional dual regulator,leucine-binding n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5ERL5_9RHIZ
DNA-binding transcriptional dual regulator,leucine-binding {ECO:0000313|EMBL:CCV07484.1}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans STM 2683.;"
transcriptional regulator AsnC-type-like protein
SCNpilot_expt_1000_bf_scaffold_11207_9
Nitratireductor aquibiodomus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7430..8407)
DNA (978bp) protein (326aa)
Di-heme cytochrome c peroxidase; K00428 cytochrome c peroxidase [EC:1.11.1.5]
Di-heme cytochrome c peroxidase n=1 Tax=Nitratireductor aquibiodomus RA22 RepID=I5BTZ4_9RHIZ
Di-heme cytochrome c peroxidase {ECO:0000313|EMBL:EIM73046.1}; TaxID=1189611 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor aquibiodomus RA22.;"
SCNpilot_expt_1000_bf_scaffold_11207_10
unknown

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comp(8404..8604)
DNA (201bp) protein (67aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_11207_11
Rubellimicrobium mesophilum, Rubellimicrobium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8607..9047)
DNA (441bp) protein (147aa)
Auxin-binding protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HST7_9RHIZ
Auxin-binding protein {ECO:0000313|EMBL:EYD74270.1}; TaxID=442562 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rubellimicrobium.;" source="Rubellimicrobium mesophilum DSM 19309.;"
auxin-binding protein
SCNpilot_expt_1000_bf_scaffold_11207_12
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9159..10178)
DNA (1020bp) protein (340aa)
Aldose 1-epimerase {ECO:0000256|PIRNR:PIRNR005096}; EC=5.1.3.3 {ECO:0000256|PIRNR:PIRNR005096};; Galactose mutarotase {ECO:0000256|PIRNR:PIRNR005096}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
Aldose 1-epimerase (EC:5.1.3.3); K01785 aldose 1-epimerase [EC:5.1.3.3]
Aldose 1-epimerase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HST9_9RHIZ
SCNpilot_expt_1000_bf_scaffold_11207_13
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10235..11617)
DNA (1383bp) protein (461aa)
Succinate-semialdehyde dehydrogenase {ECO:0000313|EMBL:EZQ16700.1}; EC=1.2.1.16 {ECO:0000313|EMBL:EZQ16700.1};; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
succinate-semialdehyde dehydrogenase; K00135 succinate-semialdehyde dehydrogenase (NADP+) [EC:1.2.1.16]
succinate-semialdehyde dehdyrogenase n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002FBF18D
Displaying 13 items

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