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SCNpilot_expt_1000_bf_scaffold_4276

Search features with annotation key words

Displaying items 1-30 of 50 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_4276_1
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..519)
DNA (519bp) protein (173aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HMS8_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EHK57950.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_4276_2
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

630..920
DNA (291bp) protein (97aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI000369A9E3
Putative uncharacterized protein {ECO:0000313|EMBL:EHK57951.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
SCNpilot_expt_1000_bf_scaffold_4276_3
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(922..1797)
DNA (876bp) protein (292aa)
Glutamyl-Q tRNA(Asp) ligase {ECO:0000313|EMBL:EKF17776.1}; EC=6.1.1.- {ECO:0000313|EMBL:EKF17776.1};; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
glutamyl-Q tRNA(Asp) synthetase; K01894 glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-] rbh
Glutamyl-Q tRNA(Asp) ligase n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2M6J1_9RHIZ rbh
SCNpilot_expt_1000_bf_scaffold_4276_4
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1905..2549
DNA (645bp) protein (215aa)
HhH-GPD family protein; K01247 DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
DNA-3-methyladenine glycosidase II n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HMT1_9RHIZ
DNA-3-methyladenine glycosidase II {ECO:0000313|EMBL:CDX49248.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
SCNpilot_expt_1000_bf_scaffold_4276_5
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2706..3224
DNA (519bp) protein (173aa)
Mll3477 protein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98G60_RHILO
hypothetical protein
Mll3477 protein {ECO:0000313|EMBL:BAB50356.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
SCNpilot_expt_1000_bf_scaffold_4276_6
R_Proteobacteria_53_8, Proteobacteria, Bacteria

Not on your lists

comp(3246..4733)
DNA (1488bp) protein (496aa)
Uncharacterized protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6USA0_9RHIZ rbh
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Proteobacteria_53_8_curated
SCNpilot_expt_1000_bf_scaffold_4276_7
Mesorhizobium sp. LNHC252B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5026..5352)
DNA (327bp) protein (109aa)
UPI0003CF2493 related cluster n=1 Tax=unknown RepID=UPI0003CF2493
ArsR family transcriptional regulator {ECO:0000313|EMBL:ESY75410.1}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;"
transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_4276_8
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5321..6649)
DNA (1329bp) protein (443aa)
Major facilitator superfamily protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HM39_9RHIZ
Major facilitator superfamily protein {ECO:0000313|EMBL:EHK58231.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
transmembrane transport protein
SCNpilot_expt_1000_bf_scaffold_4276_9
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6687..6881)
DNA (195bp) protein (65aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FDQ8_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ESX68787.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;"
uncharacterized small protein containing a coiled-coil domain
SCNpilot_expt_1000_bf_scaffold_4276_10
Amphimedon queenslandica, Amphimedon, Haplosclerida, Demospongiae, Porifera, Metazoa

Not on your lists

comp(6929..7810)
DNA (882bp) protein (294aa)
Uncharacterized protein n=1 Tax=Amphimedon queenslandica RepID=I1E6M2_AMPQE
Uncharacterized protein {ECO:0000313|EnsemblMetazoa:PAC:15699140}; TaxID=400682 species="Eukaryota; Metazoa; Porifera; Demospongiae; Haplosclerida; Niphatidae; Amphimedon.;" source="Amphimedon queenslandica (Sponge).;"
SCNpilot_expt_1000_bf_scaffold_4276_11
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8185..9834
DNA (1650bp) protein (550aa)
Fructose-1,6-bisphosphate aldolase {ECO:0000313|EMBL:EHK58257.1}; EC=4.1.2.13 {ECO:0000313|EMBL:EHK58257.1};; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
fructose-bisphosphate aldolase; K01623 fructose-bisphosphate aldolase, class I [EC:4.1.2.13] rbh
Fructose-1,6-bisphosphate aldolase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HM65_9RHIZ rbh
SCNpilot_expt_1000_bf_scaffold_4276_12
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9873..10667
DNA (795bp) protein (265aa)
G-D-S-L family lipolytic protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HM64_9RHIZ
G-D-S-L family lipolytic protein {ECO:0000313|EMBL:EHK58256.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
G-D-S-L family lipolytic protein
SCNpilot_expt_1000_bf_scaffold_4276_13
Sinorhizobium meliloti, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10585..10743)
DNA (159bp) protein (53aa)
Uncharacterized protein n=8 Tax=Rhizobium meliloti RepID=F6BUP3_SINMB
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:EHK73982.1}; TaxID=1107881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium meliloti CCNWSX0020.;"
SCNpilot_expt_1000_bf_scaffold_4276_14
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10908..12815
DNA (1908bp) protein (636aa)
AMP-dependent synthetase and ligase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HM62_9RHIZ
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:EHK58254.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
acyl-CoA synthetase/AMP-acid ligase
SCNpilot_expt_1000_bf_scaffold_4276_15
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14047..14415
DNA (369bp) protein (123aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11CS1_MESSB
glyoxalase/bleomycin resistance protein/dioxygenase; K06996
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:ABG64804.1}; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
SCNpilot_expt_1000_bf_scaffold_4276_16
Nitratireductor aquibiodomus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14428..15132
DNA (705bp) protein (235aa)
Type 11 helix-turn-helix protein n=1 Tax=Nitratireductor aquibiodomus RA22 RepID=I5C004_9RHIZ rbh
Type 11 helix-turn-helix protein {ECO:0000313|EMBL:EIM75156.1}; TaxID=1189611 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor aquibiodomus RA22.;"
Helix-turn-helix type 11 domain-containing protein
SCNpilot_expt_1000_bf_scaffold_4276_17
Sinorhizobium meliloti, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15151..16305)
DNA (1155bp) protein (385aa)
Phosphoglycerate kinase {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532}; EC=2.7.2.3 {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532};; TaxID=1107881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium meliloti CCNWSX0020.;"
phosphoglycerate kinase (EC:2.7.2.3); K00927 phosphoglycerate kinase [EC:2.7.2.3]
Phosphoglycerate kinase n=1 Tax=Sinorhizobium meliloti CCNWSX0020 RepID=H0G9L6_RHIML
SCNpilot_expt_1000_bf_scaffold_4276_18
Aurantimonas manganoxydans, Aurantimonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16392..18209)
DNA (1818bp) protein (606aa)
Sodium/hydrogen antiporter n=1 Tax=Manganese-oxidizing bacterium (strain SI85-9A1) RepID=Q1YKL1_MOBAS rbh
Sodium/hydrogen antiporter {ECO:0000313|EMBL:EAS50512.1}; TaxID=287752 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Aurantimonas.;" source="Manganese-oxidizing bacterium (strain SI85-9A1).;"
sodium/hydrogen exchanger; K11105 cell volume regulation protein A
SCNpilot_expt_1000_bf_scaffold_4276_19
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18450..19460)
DNA (1011bp) protein (337aa)
Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361160}; EC=1.2.1.- {ECO:0000256|RuleBase:RU361160};; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
glyceraldehyde-3-phosphate dehydrogenase; K00134 glyceraldehyde 3-phosphate dehydrogenase [EC:1.2.1.12] rbh
Glyceraldehyde-3-phosphate dehydrogenase n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11CR5_MESSB rbh
SCNpilot_expt_1000_bf_scaffold_4276_20
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19714..21720)
DNA (2007bp) protein (669aa)
Transketolase {ECO:0000256|RuleBase:RU004996}; EC=2.2.1.1 {ECO:0000256|RuleBase:RU004996};; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
transketolase; K00615 transketolase [EC:2.2.1.1] rbh
transketolase n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI00035CDE6F
SCNpilot_expt_1000_bf_scaffold_4276_21
Mesorhizobium sp. LNHC252B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21999..22313
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8T7F3_MESCW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ESY75392.1}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;"
SCNpilot_expt_1000_bf_scaffold_4276_22
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22322..22699
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EL98_9RHIZ
Cell division protein ZapA {ECO:0000256|SAAS:SAAS00072473}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans STM 2683.;"
hypothetical protein; K09888 cell division protein ZapA
SCNpilot_expt_1000_bf_scaffold_4276_23
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23248..23994
DNA (747bp) protein (249aa)
UPI0003CFB0ED related cluster n=1 Tax=unknown RepID=UPI0003CFB0ED
Uncharacterized protein {ECO:0000313|EMBL:KDP76277.1}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens (Sinorhizobium morelense).;"
caspase domain-containing protein
SCNpilot_expt_1000_bf_scaffold_4276_24
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23991..24599
DNA (609bp) protein (203aa)
Uncharacterized protein n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2MN86_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EKF18732.1}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
SCNpilot_expt_1000_bf_scaffold_4276_25
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24606..24908)
DNA (303bp) protein (101aa)
plasmid maintenance protein CcdB n=1 Tax=Ruegeria conchae RepID=UPI000237B264
Putative plasmid maintenance protein, CcdB {ECO:0000313|EMBL:AHK46421.1}; TaxID=1416753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens OV14.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_4276_26
Geoalkalibacter ferrihydriticus, Geoalkalibacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24908..25144)
DNA (237bp) protein (79aa)
hypothetical protein n=1 Tax=Sphingopyxis baekryungensis RepID=UPI0003B4782E
Post-segregation antitoxin CcdA {ECO:0000313|EMBL:KIH76162.1}; TaxID=1121915 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geoalkalibacter.;" source="Geoalkalibacter ferrihydriticus DSM 17813.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_4276_27
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25193..26605)
DNA (1413bp) protein (471aa)
ABC transporter, ATP-binding protein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98FA0_RHILO
ABC transporter ATP-binding protein; K15738 ATP-binding cassette, subfamily F, uup
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:BAB50667.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
SCNpilot_expt_1000_bf_scaffold_4276_28
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26997..27638)
DNA (642bp) protein (214aa)
Mlr3869 protein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98FA1_RHILO
hypothetical protein
Mlr3869 protein {ECO:0000313|EMBL:BAB50666.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
SCNpilot_expt_1000_bf_scaffold_4276_29
Mesorhizobium opportunistum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27921..28922
DNA (1002bp) protein (334aa)
thiamine ABC transporter substrate-binding protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI00031D42BA
ThiB subfamily ABC transporter periplasmic binding protein; K02064 thiamine transport system substrate-binding protein
ABC transporter, periplasmic binding protein, thiB subfamily {ECO:0000313|EMBL:AEH85821.1}; Flags: Precursor;; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075).;"
SCNpilot_expt_1000_bf_scaffold_4276_30
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29135..31465
DNA (2331bp) protein (777aa)
Thiamine transporter membrane protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HLC3_9RHIZ
Thiamine transporter membrane protein {ECO:0000313|EMBL:EHK58452.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
thiamine ABC transporter inner membrane subunit; K02063 thiamine transport system permease protein
Displaying items 1-30 of 50 in total

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