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SCNpilot_expt_1000_bf_scaffold_4936

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_4936_1
Rhodobacter sp. AKP1, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..498)
DNA (498bp) protein (166aa)
Nucleotidyltransferase n=1 Tax=Rhodobacter sp. AKP1 RepID=L1K974_9RHOB
Nucleotidyltransferase {ECO:0000313|EMBL:EKX57361.1}; TaxID=1247725 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter sp. AKP1.;"
ATPase-like protein; K06915
SCNpilot_expt_1000_bf_scaffold_4936_2
unknown

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710..883
DNA (174bp) protein (58aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_4936_3
unknown

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944..1627
DNA (684bp) protein (228aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_4936_4
Rhodobacter sphaeroides, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1492..2820)
DNA (1329bp) protein (443aa)
Uncharacterized protein n=1 Tax=Rhodobacter sphaeroides (strain ATCC 17029 / ATH 2.4.9) RepID=A3PPN0_RHOS1 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABN78296.1}; TaxID=349101 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter sphaeroides (strain ATCC 17029 / ATH 2.4.9).;"
SCNpilot_expt_1000_bf_scaffold_4936_5
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2834..3343)
DNA (510bp) protein (170aa)
GCN5-related N-acetyltransferase n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3SNN5_NITWN
N-acetyltransferase
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:ABA06106.1}; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391).;"
SCNpilot_expt_1000_bf_scaffold_4936_6

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comp(3347..3649)
DNA (303bp) protein (101aa)
Putative uncharacterized protein n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3SNN6_NITWN
Uncharacterized protein {ECO:0000313|EMBL:KKN63807.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_4936_7
unknown

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comp(3932..4246)
DNA (315bp) protein (105aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_4936_8
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4468..5667)
DNA (1200bp) protein (400aa)
Chromate transporter n=2 Tax=Oligotropha carboxidovorans RepID=B6JAB1_OLICO rbh
Chromate transport protein {ECO:0000313|EMBL:CDN94497.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;"
putative chromate transport protein; K07240 chromate transporter rbh
SCNpilot_expt_1000_bf_scaffold_4936_9
unknown

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6128..6442
DNA (315bp) protein (105aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_4936_10
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6445..7476)
DNA (1032bp) protein (344aa)
arsenic transporter n=1 Tax=Paracoccus sp. TRP RepID=UPI000225F73C rbh
Arsenical-resistance protein {ECO:0000313|EMBL:CDN94495.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;"
arsenite efflux pump protein; K03325 arsenite transporter, ACR3 family
SCNpilot_expt_1000_bf_scaffold_4936_11
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7486..7911)
DNA (426bp) protein (142aa)
Arsenate reductase {ECO:0000256|RuleBase:RU362029}; EC=1.20.4.1 {ECO:0000256|RuleBase:RU362029};; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;"
arsC1; arsenate reductase ArsC (EC:1.20.4.1)
arsenate reductase n=1 Tax=Paracoccus sp. TRP RepID=UPI000225F73B
SCNpilot_expt_1000_bf_scaffold_4936_12
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7920..8138)
DNA (219bp) protein (73aa)
Low molecular weight phosphotyrosine protein phosphatase; K03741 arsenate reductase [EC:1.20.4.1]
ArsR family transcriptional regulator n=1 Tax=Paracoccus sp. TRP RepID=UPI000225F73A
Uncharacterized protein {ECO:0000313|EMBL:CDN94493.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;"
SCNpilot_expt_1000_bf_scaffold_4936_13
Brevundimonas nasdae, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8422..8658)
DNA (237bp) protein (79aa)
Transcriptional regulator, ArsR family n=2 Tax=Oligotropha carboxidovorans RepID=B6JAP6_OLICO
ArsR family transcriptional regulator {ECO:0000313|EMBL:KIC53727.1}; TaxID=172043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas nasdae.;"
ArsR family transcriptional regulator
Displaying 13 items

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