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SCNpilot_expt_1000_bf_scaffold_6783

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_6783_1
Mesorhizobium australicum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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403..1824
DNA (1422bp) protein (474aa)
Mg2+ transporter MgtE n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KPC6_MESAW
Mg2+ transporter MgtE
Magnesium transporter MgtE {ECO:0000256|RuleBase:RU362011}; TaxID=754035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073).;"
SCNpilot_expt_1000_bf_scaffold_6783_2
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2048..2701)
DNA (654bp) protein (218aa)
OmpA/MotB domain-containing protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HW97_9RHIZ
OmpA/MotB domain-containing protein {ECO:0000313|EMBL:EHK54940.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
OmpA/MotB domain-containing protein
SCNpilot_expt_1000_bf_scaffold_6783_3
Mesorhizobium opportunistum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2799..3863)
DNA (1065bp) protein (355aa)
diguanylate cyclase n=1 Tax=Hoeflea sp. 108 RepID=UPI000372F326
diguanylate cyclase; K13590 diguanylate cyclase
Diguanylate cyclase {ECO:0000313|EMBL:AEH88554.1}; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075).;"
SCNpilot_expt_1000_bf_scaffold_6783_4
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4080..4919)
DNA (840bp) protein (280aa)
2,5-didehydrogluconate reductase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HRI2_9RHIZ rbh
2,5-didehydrogluconate reductase {ECO:0000313|EMBL:EHK56646.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
2,5-diketo-D-gluconate reductase rbh
SCNpilot_expt_1000_bf_scaffold_6783_5
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4971..5588
DNA (618bp) protein (206aa)
Uncharacterized protein n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2MG80_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EKF19715.1}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_6783_6
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5920..6396
DNA (477bp) protein (159aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HRI4_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EHK56648.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
isoprenylcysteine carboxyl methyltransferase
SCNpilot_expt_1000_bf_scaffold_6783_7
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6484..6870)
DNA (387bp) protein (129aa)
MerR family transcriptional regulator n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HRI6_9RHIZ
Transcriptional regulator, MerR family {ECO:0000313|EMBL:CDX44195.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
putative transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_6783_8
R_Rhodospirillales_65_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7497..7838)
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:94 RepID=R6ZFK7_9FIRM
Tax=RIFCSPLOWO2_01_FULL_Rhodospirillales_65_14_curated
SCNpilot_expt_1000_bf_scaffold_6783_9
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8521..11187
DNA (2667bp) protein (889aa)
Alanine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015689}; EC=6.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015673};; Alanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00036}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
alanyl-tRNA synthetase; K01872 alanyl-tRNA synthetase [EC:6.1.1.7]
Alanine--tRNA ligase n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5F7T6_9RHIZ
SCNpilot_expt_1000_bf_scaffold_6783_10
Rhodobacteraceae bacterium KLH11, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11264..11596
DNA (333bp) protein (111aa)
Fumarylacetoacetate hydrolase family protein n=1 Tax=Rhodobacteraceae bacterium KLH11 RepID=B9NS20_9RHOB
Fumarylacetoacetate hydrolase family protein {ECO:0000313|EMBL:EEE39031.1}; TaxID=467661 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae.;" source="Rhodobacteraceae bacterium KLH11.;"
fumarylacetoacetate hydrolase
SCNpilot_expt_1000_bf_scaffold_6783_11
Paracoccus sphaerophysae, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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11593..11958
DNA (366bp) protein (122aa)
Fumarylacetoacetate hydrolase family protein n=1 Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3VFX0_9RHOB
Fumarylacetoacetase {ECO:0000313|EMBL:KGJ09281.1}; TaxID=690417 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus sphaerophysae.;"
fumarylacetoacetate (FAA) hydrolase
SCNpilot_expt_1000_bf_scaffold_6783_12
Mesorhizobium sp. LNJC394B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12044..13078
DNA (1035bp) protein (345aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=1287274 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNJC394B00.;"
tRNA-dihydrouridine synthase A; K05539 tRNA-dihydrouridine synthase A [EC:1.-.-.-]
tRNA-dihydrouridine synthase A n=2 Tax=Mesorhizobium sp. LNJC394B00 RepID=V7G074_9RHIZ
SCNpilot_expt_1000_bf_scaffold_6783_13
Mesorhizobium sp. LSJC269B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13178..13879)
DNA (702bp) protein (234aa)
UPI0003CE496F related cluster n=1 Tax=unknown RepID=UPI0003CE496F
Aspartic protease {ECO:0000313|EMBL:ESW88454.1}; TaxID=1287326 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC269B00.;"
hypothetical protein; K06985 aspartyl protease family protein
SCNpilot_expt_1000_bf_scaffold_6783_14
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13884..14111)
DNA (228bp) protein (76aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI000301F15B
Uncharacterized protein {ECO:0000313|EMBL:CDX35990.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
hypothetical protein; K06938
SCNpilot_expt_1000_bf_scaffold_6783_15
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14262..15344
DNA (1083bp) protein (361aa)
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase {ECO:0000313|EMBL:CCV13712.1}; EC=2.4.2.21 {ECO:0000313|EMBL:CCV13712.1};; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC:2.4.2.21); K00768 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21]
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5F8W8_9RHIZ
SCNpilot_expt_1000_bf_scaffold_6783_16
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15195..16721)
DNA (1527bp) protein (509aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C084A000.;"
ATPase domain-containing protein; K07716 two-component system, cell cycle sensor histidine kinase PleC [EC:2.7.13.3]
UPI0003CFAA90 related cluster n=1 Tax=unknown RepID=UPI0003CFAA90
SCNpilot_expt_1000_bf_scaffold_6783_17
Mesorhizobium sp. LNHC252B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16774..17442
DNA (669bp) protein (223aa)
UPI0003CEBE61 related cluster n=1 Tax=unknown RepID=UPI0003CEBE61
Nuclease {ECO:0000313|EMBL:ESY72899.1}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;"
nuclease
SCNpilot_expt_1000_bf_scaffold_6783_18
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17455..18066
DNA (612bp) protein (204aa)
Glutathione S-transferase domain-containing protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HV65_9RHIZ
Glutathione S-transferase {ECO:0000313|EMBL:EXL01734.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
glutathione S-transferase domain-containing protein
SCNpilot_expt_1000_bf_scaffold_6783_19
Mesorhizobium opportunistum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18070..18699
DNA (630bp) protein (210aa)
Uncharacterized protein n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7YBQ0_MESOW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEH88874.1}; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075).;"
SCNpilot_expt_1000_bf_scaffold_6783_20
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18799..19296
DNA (498bp) protein (166aa)
AsnC family transcriptional regulator n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HV67_9RHIZ
AsnC family transcriptional regulator {ECO:0000313|EMBL:EHK55370.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
transcriptional regulator AsnC-type-like protein; K05800 Lrp/AsnC family transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_6783_21
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19303..19560)
DNA (258bp) protein (86aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HRR5_9RHIZ
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:EHK56578.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
SCNpilot_expt_1000_bf_scaffold_6783_22
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(19879..20595)
DNA (717bp) protein (239aa)
Uncharacterized protein n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5F4Y9_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CCV06941.1}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans STM 2683.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_6783_23
Mesorhizobium opportunistum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20599..21117)
DNA (519bp) protein (173aa)
oxidoreductase n=1 Tax=Hoeflea sp. 108 RepID=UPI00035F017E
6-phosphogluconate dehydrogenase NAD-binding protein
6-phosphogluconate dehydrogenase NAD-binding protein {ECO:0000313|EMBL:AEH88879.1}; Flags: Precursor;; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075).;"
Displaying 23 items

View Taxonomy