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SCNpilot_expt_1000_bf_scaffold_2714_5

Organism: SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial

near complete RP 43 / 55 MC: 2 BSCG 43 / 51 MC: 2 ASCG 9 / 38
Location: 3141..3737

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, TetR family n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1B786_PARDP similarity UNIREF
DB: UNIREF100
  • Identity: 78.8
  • Coverage: 198.0
  • Bit_score: 300
  • Evalue 1.20e-78
TetR family transcriptional regulator {ECO:0000313|EMBL:KFE35054.1}; TaxID=1317124 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Thioclava.;" source="Thioclava sp. 13D2W-2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.3
  • Coverage: 198.0
  • Bit_score: 305
  • Evalue 3.90e-80
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 78.8
  • Coverage: 198.0
  • Bit_score: 300
  • Evalue 3.70e-79

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Taxonomy

Thioclava sp. 13D2W-2 → Thioclava → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 597
ATGCGCAAGTCGGCGGACCTTCGCAAGGCCGAGATCGTCGCCGCGGTGCTGGACCTGGCCGACAGGATCGGGCCGGACCGGGTGACGACCGGGGCGGCGGCCTCGGTGATCGGAGTGACGCAGGCGGCGCTGTTCCGGCATTTCCCGACCAAAGCAGAACTCTGGCAGGCCGTGGCCGAGTATGTGGCCGAAGGGCTGACGGCGGCGTGGGACGACGCCTTGAGCCGCACCGGCGGGCCGATCGTGCGGCTGCGCGCGCTCATCGCTGCGCAATTCGCGCAGATCGCGGCGACGCCCGCCCTTCCGATGCTGCTGTTCTCGCGCGAACTGAACGTCACCAATGCGGAGTTGCGCACCACCTTTCGCGATACGCTCATGGCCTTTCACGGCCTGCTCGCGCGCGAGGTCGATTCCGGACGGAAGGCAGGTCTCATCCGCGATGACATTGCAGCAAACGATGCGGCGGTGCTTCTGACCTCACTCGTACAGGGCGTCGCGATCCGTTGGGCACTCGGAACGCGCGATTTCGAACTGAGCGATGAGGGGCTGCGGCTGTTCGACGTGCAATGCCGGCTTCTGGTCGTCGAAGGAAGCTAG
PROTEIN sequence
Length: 199
MRKSADLRKAEIVAAVLDLADRIGPDRVTTGAAASVIGVTQAALFRHFPTKAELWQAVAEYVAEGLTAAWDDALSRTGGPIVRLRALIAAQFAQIAATPALPMLLFSRELNVTNAELRTTFRDTLMAFHGLLAREVDSGRKAGLIRDDIAANDAAVLLTSLVQGVAIRWALGTRDFELSDEGLRLFDVQCRLLVVEGS*