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SCNpilot_expt_1000_bf_scaffold_2714

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_2714_1
unknown

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1..111
DNA (111bp) protein (37aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_2714_2
Mesorhizobium sp. LNHC229A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(323..658)
DNA (336bp) protein (112aa)
UPI0003CDEBAF related cluster n=1 Tax=unknown RepID=UPI0003CDEBAF
DNA-binding protein {ECO:0000313|EMBL:ESY92819.1}; TaxID=1287240 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC229A00.;"
XRE family transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_2714_3
Azospirillum thiophilum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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895..1782
DNA (888bp) protein (296aa)
Putative uncharacterized protein n=1 Tax=Acidimicrobium ferrooxidans (strain DSM 10331 / JCM 15462 / NBRC 103882 / ICP) RepID=C7LXW5_ACIFD
Endonuclease {ECO:0000313|EMBL:KJR66322.1}; TaxID=528244 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum thiophilum.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_2714_4
Hoeflea sp. BAL378, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1983..3128)
DNA (1146bp) protein (382aa)
Uncharacterized protein n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2J0X1_POLGS
Uncharacterized protein {ECO:0000313|EMBL:KGF69849.1}; TaxID=1547437 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. BAL378.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_2714_5
Thioclava sp. 13D2W-2, Thioclava, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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3141..3737
DNA (597bp) protein (199aa)
Transcriptional regulator, TetR family n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1B786_PARDP
TetR family transcriptional regulator {ECO:0000313|EMBL:KFE35054.1}; TaxID=1317124 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Thioclava.;" source="Thioclava sp. 13D2W-2.;"
TetR family transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_2714_6
Paracoccus denitrificans, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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3741..4886
DNA (1146bp) protein (382aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1B785_PARDP
RND family efflux transporter MFP subunit; K02005 HlyD family secretion protein
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:ABL71379.1}; Flags: Precursor;; TaxID=318586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus denitrificans (strain Pd 1222).;"
SCNpilot_expt_1000_bf_scaffold_2714_7
Paracoccus versutus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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4883..6016
DNA (1134bp) protein (378aa)
Uncharacterized protein n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1B784_PARDP rbh
ABC transporter permease {ECO:0000313|EMBL:KGJ04308.1}; TaxID=34007 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus versutus (Thiobacillus versutus).;"
hypothetical protein; K02004 putative ABC transport system permease protein rbh
SCNpilot_expt_1000_bf_scaffold_2714_8
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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6018..6710
DNA (693bp) protein (231aa)
ABC transporter related protein n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1B783_PARDP
ABC transporter {ECO:0000313|EMBL:EZQ17803.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
ABC transporter; K02003 putative ABC transport system ATP-binding protein
SCNpilot_expt_1000_bf_scaffold_2714_9
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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6725..7102
DNA (378bp) protein (126aa)
Conserved hypothetical membrane protein n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1B782_PARDP
Uncharacterized protein {ECO:0000313|EMBL:EZQ17802.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_2714_10
Paracoccus denitrificans, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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7182..8267
DNA (1086bp) protein (362aa)
Heavy metal translocating P-type ATPase n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1B781_PARDP
heavy metal translocating P-type ATPase
Heavy metal translocating P-type ATPase {ECO:0000313|EMBL:ABL71375.1}; Flags: Precursor;; TaxID=318586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus denitrificans (strain Pd 1222).;"
SCNpilot_expt_1000_bf_scaffold_2714_11
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8494..10167)
DNA (1674bp) protein (558aa)
Dihydroxy-acid dehydratase {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040}; Short=DAD {ECO:0000256|HAMAP-Rule:MF_00012};; EC=4.2.1.9 {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040};; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
ilvD; dihydroxy-acid dehydratase; K01687 dihydroxy-acid dehydratase [EC:4.2.1.9] rbh
Dihydroxy-acid dehydratase n=1 Tax=Rhizobium grahamii CCGE 502 RepID=S3I292_9RHIZ rbh
SCNpilot_expt_1000_bf_scaffold_2714_12
Methyloceanibacter caenitepidi, Methyloceanibacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(10217..11128)
DNA (912bp) protein (304aa)
Putative phage uncharacterized protein n=1 Tax=Methylobacterium extorquens (strain DSM 5838 / DM4) RepID=C7CCL4_METED
phage protein
Phage-related protein {ECO:0000313|EMBL:BAQ16576.1}; TaxID=1384459 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methyloceanibacter.;" source="Methyloceanibacter caenitepidi.;"
SCNpilot_expt_1000_bf_scaffold_2714_13
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(11125..11637)
DNA (513bp) protein (171aa)
UPI0003D06ADE related cluster n=1 Tax=unknown RepID=UPI0003D06ADE
Uncharacterized protein {ECO:0000313|EMBL:ESZ28730.1}; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C084A000.;"
hypothetical protein
Displaying 13 items

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