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SCNpilot_expt_1000_bf_scaffold_8802

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_8802_1
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..581
DNA (579bp) protein (193aa)
Manganese-binding protein lipoprotein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6V7E5_9RHIZ rbh
Manganese-binding protein lipoprotein {ECO:0000313|EMBL:ENN89076.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
zinc ABC transporter; K02077 zinc/manganese transport system substrate-binding protein rbh
SCNpilot_expt_1000_bf_scaffold_8802_2
Agrobacterium rhizogenes, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(638..946)
DNA (309bp) protein (103aa)
Uncharacterized protein n=2 Tax=Rhizobium/Agrobacterium group RepID=B9JAQ6_AGRRK
hypothetical protein
Stress responsive protein {ECO:0000313|EMBL:KEA05517.1}; TaxID=359 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium rhizogenes.;"
SCNpilot_expt_1000_bf_scaffold_8802_3
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1076..1741)
DNA (666bp) protein (222aa)
hypothetical protein n=1 Tax=Rhizobium loti RepID=UPI00037228A1
NAD dependent epimerase/dehydratase family protein {ECO:0000313|EMBL:AID32281.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
NAD-dependent epimerase/dehydratase
SCNpilot_expt_1000_bf_scaffold_8802_4
Burkholderia sp. RPE64, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1845..3296)
DNA (1452bp) protein (484aa)
DNA-binding protein n=1 Tax=Comamonas sp. B-9 RepID=UPI000395866B rbh
transcriptional regulator GntR family with aminotransferase domain
Transcriptional regulator GntR family with aminotransferase domain {ECO:0000313|EMBL:BAN27956.1}; TaxID=758793 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. RPE64.;"
SCNpilot_expt_1000_bf_scaffold_8802_5
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3336..3962)
DNA (627bp) protein (209aa)
FMN-dependent NADH-azoreductase {ECO:0000256|HAMAP-Rule:MF_01216}; EC=1.7.-.- {ECO:0000256|HAMAP-Rule:MF_01216};; Azo-dye reductase {ECO:0000256|HAMAP-Rule:MF_01216}; FMN-dependent NADH-azo compound oxidoreductase {ECO:0000256|HAMAP-Rule:MF_01216}; TaxID=1453503 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleovorans/pseudoalcaligenes group.;" source="Pseudomonas pseudoalcaligenes AD6.;"
acyl carrier protein phosphodiesterase; K01118 FMN-dependent NADH-azoreductase [EC:1.7.-.-]
FMN-dependent NADH-azoreductase n=1 Tax=Pseudomonas mendocina RepID=UPI00037558BF
SCNpilot_expt_1000_bf_scaffold_8802_6
Burkholderia gladioli, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3959..4396)
DNA (438bp) protein (146aa)
GCN5-related N-acetyltransferase n=1 Tax=Burkholderia gladioli (strain BSR3) RepID=F2LQS2_BURGS
GCN5-related N-acetyltransferase
GCN5 family acetyltransferase {ECO:0000313|EMBL:KGE08601.1}; TaxID=28095 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia gladioli (Pseudomonas marginata) (Phytomonas marginata).;"
SCNpilot_expt_1000_bf_scaffold_8802_7
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4673..5356
DNA (684bp) protein (228aa)
Uncharacterized protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LJT3_RHITR rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AGB70335.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_1000_bf_scaffold_8802_8
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5363..5860)
DNA (498bp) protein (166aa)
Acetyltransferase, GNAT family n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LJQ9_RHITR
acetyltransferase, GNAT family
Acetyltransferase, GNAT family {ECO:0000313|EMBL:AGB70334.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_1000_bf_scaffold_8802_9
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6018..6458)
DNA (441bp) protein (147aa)
Ribonuclease H {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437}; Short=RNase H {ECO:0000256|HAMAP-Rule:MF_00042};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437};; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
Ribonuclease H n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LG01_RHITR rbh
rnhA; ribonuclease HI rbh
SCNpilot_expt_1000_bf_scaffold_8802_10
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6455..6739)
DNA (285bp) protein (95aa)
Homoserine kinase {ECO:0000256|HAMAP-Rule:MF_00301, ECO:0000256|SAAS:SAAS00085804}; Short=HK {ECO:0000256|HAMAP-Rule:MF_00301};; Short=HSK {ECO:0000256|HAMAP-Rule:MF_00301};; EC=2.7.1.39 {ECO:0000256|HAMAP-Rule:MF_00301, ECO:0000256|SAAS:SAAS00085809};; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
Homoserine kinase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LGI6_RHITR
thrB; homoserine kinase
Displaying 10 items

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