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SCNpilot_expt_1000_bf_scaffold_3875

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_3875_1
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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259..726
DNA (468bp) protein (156aa)
PfkB domain protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6UUD0_9RHIZ
PfkB domain protein {ECO:0000313|EMBL:ENN85295.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
kinase, PfkB family
SCNpilot_expt_1000_bf_scaffold_3875_2
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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944..2668
DNA (1725bp) protein (575aa)
Lipid A export ATP-binding protein/permease protein MsbA n=1 Tax=Rhizobium freirei PRF 81 RepID=N6TXZ9_9RHIZ rbh
Lipid A export ATP-binding protein/permease protein MsbA {ECO:0000313|EMBL:ENN85294.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
multidrug resistance ABC transporter; K06147 ATP-binding cassette, subfamily B, bacterial rbh
SCNpilot_expt_1000_bf_scaffold_3875_3
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2736..4148)
DNA (1413bp) protein (471aa)
Putative DNA-binding protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LT97_RHITR rbh
putative DNA-binding protein rbh
Putative DNA-binding protein {ECO:0000313|EMBL:AGB74508.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_1000_bf_scaffold_3875_4
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4354..5643
DNA (1290bp) protein (430aa)
Isocitrate lyase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LTF0_RHITR rbh
aceA; isocitrate lyase rbh
Isocitrate lyase {ECO:0000313|EMBL:AGB74507.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_1000_bf_scaffold_3875_5
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5670..5915
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LUX0_RHITR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB74506.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_1000_bf_scaffold_3875_6
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5987..6949)
DNA (963bp) protein (321aa)
Putative L-asparaginase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LWH8_RHITR rbh
putative L-asparaginase rbh
Putative L-asparaginase {ECO:0000313|EMBL:AGB74505.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_1000_bf_scaffold_3875_7
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6946..8397)
DNA (1452bp) protein (484aa)
L-asparagine permease n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LWG7_RHITR rbh
L-asparagine permease rbh
L-asparagine permease {ECO:0000313|EMBL:AGB74504.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_1000_bf_scaffold_3875_8
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8670..9332
DNA (663bp) protein (221aa)
Aspartate ammonia-lyase {ECO:0000256|RuleBase:RU362017}; Short=Aspartase {ECO:0000256|RuleBase:RU362017};; EC=4.3.1.1 {ECO:0000256|RuleBase:RU362017};; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
Aspartate ammonia-lyase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LT89_RHITR
aspA; aspartate ammonia-lyase
SCNpilot_expt_1000_bf_scaffold_3875_9
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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9280..9744
DNA (465bp) protein (155aa)
Aspartate ammonia-lyase {ECO:0000256|RuleBase:RU362017}; Short=Aspartase {ECO:0000256|RuleBase:RU362017};; EC=4.3.1.1 {ECO:0000256|RuleBase:RU362017};; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
Aspartate ammonia-lyase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LT89_RHITR
aspA; aspartate ammonia-lyase
Displaying 9 items

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